Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi01g0579 ATGGATCTGTATGTTCGGATGGATGCTTCAGAACTAGGTTCGCAGAATGAGGGTGGGAAGAAGATGACAATAGCAGTTGCCACCGTTATACCCCTTGTTTTTGGGATGCTTTTATTTGCTGGGATATTTTATATCAGAAATGTGAGAAGAAAAATGAATGAGAAACCAAAATATACTGGAGCTCGAAATAGTGAAGGACAGGAAGAAGATATGGATCTCCCGTTGCTTGAGATGTCTGAAATTTCTACGGCCACTGATGACTTCTCAATGAAAAAGAAAATTGGAGAAGGGGGCTTTGGAACAGTATACAAGGGAAGACTAGAAAATGAGCACGAAATTGCAGTGAAAAGACTTTCAAAAGTTTCAGGACAAGGAGTAGATGAGTTCAAGAATGAAGTAAAACTGATTGCAAAACTTCAACATCGGAATCTTGTCAAATTAGTTGGATGCTGCATACAAGAACAAGAGAGAGTGCTAGTCTATGAATACATGCCTAATGGTAGCCTAGACTCCTTCATATTTGAAGGAAGCACAAGCAGAGTAGTGGGGACTTATGGCTACATGTCGCCAGAATATGCTGCCGATGGGTTATTTTCAATTAAATCTGATGTTTTCAGTTTTGGTGTTTTGATGCTAGAGATAATAATTGGGAGAAGAAATAAAGGGTTTTATCATGCAGATAGTACTAATAACCTTGTTGGTCATGCATGGACACAATGGAAAGAAGGGAGGGTTCTAGAACTCATTGACAAAAATATTGAGGACTCATGTAATGAACTAGAAGTATTACGCTGTATACATATTGGTCTTTTGTGCGTTCAACATAATCCAGAAGATAGACCTGCTATGTCCATGGTGGTTCTAATGCTAGGAAGCAATATGGAATTGACAGAGCCTAAGCAACCTGGTTTTTATGAGAGGAAACTTTCAATTGAAATAAATTCTTCATCGACTCAGTTAGAATCTGCATCTACTAATGAAATAACAATTTCTCAATTAGAAGCTCGATAA 1011 0.3798 MDLYVRMDASELGSQNEGGKKMTIAVATVIPLVFGMLLFAGIFYIRNVRRKMNEKPKYTGARNSEGQEEDMDLPLLEMSEISTATDDFSMKKKIGEGGFGTVYKGRLENEHEIAVKRLSKVSGQGVDEFKNEVKLIAKLQHRNLVKLVGCCIQEQERVLVYEYMPNGSLDSFIFEGSTSRVVGTYGYMSPEYAADGLFSIKSDVFSFGVLMLEIIIGRRNKGFYHADSTNNLVGHAWTQWKEGRVLELIDKNIEDSCNELEVLRCIHIGLLCVQHNPEDRPAMSMVVLMLGSNMELTEPKQPGFYERKLSIEINSSSTQLESASTNEITISQLEAR 336
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi01g0579 336 Gene3D Transferase(Phosphotransferase) domain 1 164 306 - -
Mibi01g0579 336 Gene3D Phosphorylase Kinase; domain 1 48 163 - -
Mibi01g0579 336 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase B120 172 295 - -
Mibi01g0579 336 ProSiteProfiles Protein kinase domain profile. 88 336 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi01g0579 336 SUPERFAMILY Protein kinase-like (PK-like) 72 294 IPR011009 -
Mibi01g0579 336 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 51 163 - -
Mibi01g0579 336 ProSitePatterns Protein kinases ATP-binding region signature. 94 116 IPR017441 GO:0005524
Mibi01g0579 336 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 19 175 - -
Mibi01g0579 336 Pfam Domain of unknown function (DUF3403) 293 336 IPR021820 GO:0004674
Mibi01g0579 336 Pfam Protein tyrosine and serine/threonine kinase 89 175 IPR001245 GO:0004672|GO:0006468
Mibi01g0579 336 Pfam Protein tyrosine and serine/threonine kinase 185 288 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi01g0579 Mibi-ChrMibi01 5492780 5495188 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi01g0579 29 336 Receptor kinase-like Gene Family AT4G04510 33.509 1.04e-51 179
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Mibi01g0579 PK_Tyr_Ser-Thr 5e-10 CL0016