Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi01g0564 ATGAAGGGTGAATCAACAGGACTGATAATTGGGATTTCAATTGGCGTAGTGATTGGCGTGATTTTGGCTATTTCTGCACTTTTGTGTGTGAGATACCATAGGAGGAGATCACAGATTGGAAATAGCAGTTCAAGGAGGGCGGCTACTATACCCATCCGTACAAATGGTGCTGATTCTTGTAACATCCTATCTGACTCAACCTTAGGCCCAGAATCTCCTGTTAAGTCTGGTCGTAGTGCCATGTCCTTCTGGTTTGATGGCTTCAAGAGAAACAACGTTGTTTCAGCTTCTGGAATACCCGAATATCCTTACAAGGATTTGCAGAAGGCGACCGGTAACTTTACAACACTTCTAGGACAAGGTGCATTTGGTCCTGTTTATAAAGCTCACATGTCCACCGGTGAGACCGTTGCAGTTAAAGTTCTGGCAACTAACTCTAAGCAAGGGGAGAGAGAATTTCATGCAGAGGTGATGTTATTGGGAAGACTGCACCATCGAAACCTGGTTAATTTGGTTGGATATTGCGCAGAGAAGGGACAGCATATTCTTGTATATGTCTATATGAGCAACGGCAGCTTAGCTTCCCACTTGTACAGTAAGGAGAATGGAGGGATGAGCTGGGATTTGAGAGTTCACATTGCTCTAGATATAGCAAGAGGCTTGGAGTATCTTCATGATGGGGCAGTTCCTCCAGTAATCCACAGAGATATCAAGTCTTCTAACATTTTGCTAGACCAGTCCATGAGAGCCAGGGTAGCTGATTTTGGACTGTCAAGAGAAGAGAAGGTAGACAAGCAAGCAGCCATAAGAGGAACATTTGGGTATCTAGACCCAGAGTACATATCCTCTGCAACATTCACTAAGAAAAGTGATGTGTACAGTTATGGAGTGTTGCTTTTTGAACTCATAGCAGGCAGAAATCCTCAACAAGGTCTCATGGAATTGGTTGAGCTGGCGGCGATGAACAGTGAGGGGAAAATGGGGTGGGAGGAGATAGTGGACTCTGCATTAGAAGGAGAATATGATGGAGAGGAGTTGAATGAGGTAGCAGGACTTGCATATAAGTGCATAAACCGAGCCCCAAGGAAGAGACCTTCCATGAGAGACGTGGTTCAAGTGCTCACAAGGATTCTTAAAACAAGAAATGGTCAAAAGCGTCACAGAAAGGAATTGTCTGCTACGGCAGATGAAGTTTCCATTGATGTGGATCACCCTCAAGCAAGGATTCATCGCAGAGAAGAATCTATGGATAGTACAGCTGACACCTATGAAGTATGA 1278 0.4444 MKGESTGLIIGISIGVVIGVILAISALLCVRYHRRRSQIGNSSSRRAATIPIRTNGADSCNILSDSTLGPESPVKSGRSAMSFWFDGFKRNNVVSASGIPEYPYKDLQKATGNFTTLLGQGAFGPVYKAHMSTGETVAVKVLATNSKQGEREFHAEVMLLGRLHHRNLVNLVGYCAEKGQHILVYVYMSNGSLASHLYSKENGGMSWDLRVHIALDIARGLEYLHDGAVPPVIHRDIKSSNILLDQSMRARVADFGLSREEKVDKQAAIRGTFGYLDPEYISSATFTKKSDVYSYGVLLFELIAGRNPQQGLMELVELAAMNSEGKMGWEEIVDSALEGEYDGEELNEVAGLAYKCINRAPRKRPSMRDVVQVLTRILKTRNGQKRHRKELSATADEVSIDVDHPQARIHRREESMDSTADTYEV 425
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Mibi01g0564 425 FunFam Calcium/calmodulin-regulated receptor-like kinase 1 86 187 - -
Mibi01g0564 425 Gene3D Phosphorylase Kinase; domain 1 86 187 - -
Mibi01g0564 425 CDD STKc_IRAK 118 377 - -
Mibi01g0564 425 Pfam Protein tyrosine and serine/threonine kinase 115 374 IPR001245 GO:0004672|GO:0006468
Mibi01g0564 425 PANTHER OS01G0750732 PROTEIN 3 385 - -
Mibi01g0564 425 SMART serkin_6 112 378 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi01g0564 425 FunFam calcium/calmodulin-regulated receptor-like kinase 1 188 396 - -
Mibi01g0564 425 ProSiteProfiles Protein kinase domain profile. 112 378 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi01g0564 425 SUPERFAMILY Protein kinase-like (PK-like) 100 383 IPR011009 -
Mibi01g0564 425 ProSitePatterns Serine/Threonine protein kinases active-site signature. 232 244 IPR008271 GO:0004672|GO:0006468
Mibi01g0564 425 MobiDBLite consensus disorder prediction 387 419 - -
Mibi01g0564 425 Gene3D Transferase(Phosphotransferase) domain 1 188 402 - -
Mibi01g0564 425 MobiDBLite consensus disorder prediction 381 425 - -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Mibi01g0564 Mibi-ChrMibi01 5266888 5268773 Dispersed/Wgd
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi01g0564 98 374 Receptor kinase-like Gene Family AT3G19300 44.876 4.75e-74 242
       

Transcription factors information


Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-2 Mibi01g0564 PK_Tyr_Ser-Thr 3.1e-52 CL0016