Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi01g0562 ATGCCAACAGTTTGGTTCTCTCTCAAGAAGTCACTACACTGTAAATCAGAGCCATCGGAAGTTCATGACCCGAAATCCAGAAAGCATTTGAGCACAATCTTAACGAAAAGGGGTGGTAGGTCTGGGTGTTCGAGGAGTATAGCAAATCTCAAAGATGTAATCCATGGAAGCAAAAGGCATCTCGAGAAGCCACCAAGTTGCAGTCCAAGATCCATTGGGAGCAGTGAGTTTCTCAACCCAATAACCCACGAAGTGATTTTAAGTAACTCAAGATGTGAGCTTAAAATCACTGGTTTTGGAGGATTTCAAGATGGGGTTGGCGGCGGCGGCGGCTCTAACGGCGGCGGTGCAGGTGGTGGTGGTAATAATGGTGGTGGTAGTGGTGGTTCTACCTTTGTGGGTACTTTAAGGCCTGGGACACCAGGACCTGGAGGGCACCCTACAATGCACTACTTTAATCCTTCTTTTAGGACATCATCAACAACTCCTCCAAGGAAATCTCCAAGTCCTTTTCTTTTATCAGATAAAGAAGGGTCTGCTTTGCAACATGGTGGTGGTGGTGCTGGTGGGGTTCATTCTAGCAATAGGATGTCTCTTGAGACTGATTCTAATGGATGTTCCACCGTCACTTGTCACAAATGTGGAGAGCAATTTACCAAATGGGAAGCTGCTGAGTCTCATCATCTCTCAAAGCATGCTGTGACTGAGCTTGTGGAAGGTGATTCATCAAGGAAGATAGTGGAGATAATATGCAGGACGAGCTGGTTAAAGTCTGAGAATCACTGTGGCCGAATAGAGAGAGTTTTGAAGGTACACAACATGCAAAAGACACTAGCTCGATTCGAAGAGTACAGAGAGATGGTAAAAATTAAAGCAAGCAAGCTCCAAAAGAAACATCCTCGGTGTCTTGCTGATGGGAATGAGCTTTTAAGGTTCTATGGCACAACCGTGTCCTGCAATCTTGGTCTCAACGGCTCATCCAGCCTCTGCCTCTCAGAAAAATGTTGTGTTTGTAGAATTATCAGAAATGGGTTTTCTGCAAAGAAGGAGCTCAAGGGTGGAATAGGAGTTTTCACAACTTCTACAAGCGGAAGAGCATTTGAATCTATAGAGATACTTGATGATGACATTTCAGTCAGAAAAGCACTTATTGTTTGCAGAGTAATAGCTGGCAGAGTTCATAGGCCACTCGACAACATTCAGGAAATGGCAGGTCAAACCGGGTTTGATTCTTTGGCCGGAAAGGTTGGTCTTTATTCAAACATTGAGGAGCTTTATTTGCTCAATCCTAAAGCCCTTCTTCCTTGCTTTGTCGTAATTTGCAAGCCCTGA 1332 0.4467 MPTVWFSLKKSLHCKSEPSEVHDPKSRKHLSTILTKRGGRSGCSRSIANLKDVIHGSKRHLEKPPSCSPRSIGSSEFLNPITHEVILSNSRCELKITGFGGFQDGVGGGGGSNGGGAGGGGNNGGGSGGSTFVGTLRPGTPGPGGHPTMHYFNPSFRTSSTTPPRKSPSPFLLSDKEGSALQHGGGGAGGVHSSNRMSLETDSNGCSTVTCHKCGEQFTKWEAAESHHLSKHAVTELVEGDSSRKIVEIICRTSWLKSENHCGRIERVLKVHNMQKTLARFEEYREMVKIKASKLQKKHPRCLADGNELLRFYGTTVSCNLGLNGSSSLCLSEKCCVCRIIRNGFSAKKELKGGIGVFTTSTSGRAFESIEILDDDISVRKALIVCRVIAGRVHRPLDNIQEMAGQTGFDSLAGKVGLYSNIEELYLLNPKALLPCFVVICKP 443
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi01g0562 443 MobiDBLite consensus disorder prediction 152 168 - -
Mibi01g0562 443 ProSitePatterns Zinc finger C2H2 type domain signature. 211 232 IPR013087 -
Mibi01g0562 443 Gene3D - 224 442 - -
Mibi01g0562 443 PANTHER C2H2-LIKE ZINC FINGER PROTEIN 4 441 - -
Mibi01g0562 443 SUPERFAMILY ADP-ribosylation 234 442 - -
Mibi01g0562 443 FunFam C2H2-like zinc finger protein 233 442 - -
Mibi01g0562 443 MobiDBLite consensus disorder prediction 110 194 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi01g0562 Mibi-ChrMibi01 5257355 5259133 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi01g0562 1 443 C2H2 Transcription Factor Family AT5G54630 67.442 0.0 582
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Mibi01g0562 None None None