Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi01g0560 ATGGCAATTCGGCGAATTTTGAGTGTTGCCACGGTCACCTTTTGCGTTCTTTTGTTTCTTCTTCTTACTTCAGCTGGTAACTTGAAAGAGAGTGAGGAAACACGAACAGACTTCCTTAGCCAGCTACTTGATCCGTCGTCGTCTGGATTGTTGTTAGATGATAACACGGCGGAACAGATATGGTCCTCATGCTGGGTGGATTTGATTCAGTTAAAGGGAGGGGCAGAAGATCTTGTTGTATGGTTCCCACAAGAACCATCCAGGAGCACTGATGAAAATTCAGAATTCCGATATTTGTTGAGAGAAAACATTCAAAAATTGATTAATGCTCACCATCCACAGTTAAAGCAAACTTTTCTTCATTGTTTGAGACAAAATGGTCTACCATTGCATGTCTCTGGAGAAGAGGCTGAGTCTAAGACATGGCATGCCTCCTTTATAGAATCAACGTTTTCCAGATCCAGCATACTAAGAAGAAATTTGGCTCAGGAATCTCCTCAACACATACCATTAGCACCTAGCCCAGGTCCCTCAGTTATGTCACCAGCTCCCAATCCAGGACCATCACTAGTTCCAGTCACATCACCTGCCATCTCTCAAGCTCCCGAATCTGGGCATCCTTCTTCATCACCTGAAACTCCATTCTTCCGACAGCTGGATCCTCCAGCTACTGGGGATACCACTGCACAGCCATCTTCAGTTACTGATACACAGGCAAATAAGAAAAGTAATCATGAAAGAACAGTTGTTCTTGCCGTAGTAATAACTGCTCTTGTGACATTTGTAATTGCAGCACTTCTATTTTTATGCTGCAGTAGGTTTTATAGGACTGGTCGAGGTAAACAAAATGATGAGAGGCCCCTTCTCAGCTTGAGCATGGGTGACTACTCTATCGGCTCTTCCCGTTATCCTTTTGGAAATTCAATCAAAGAGGAGAAGGTTGGGTTTCAGTCATCAAGTAATAACACTGATGACCACAAAAAGATATCCTCTGCGTACACCAATTCCCAAGTTAGCACCAATATTTTACATACCACAGTGCAGGAAGCTCAATCAGTAGGAGCTGTCGGTGTTGCTGAGGGAACCACCACTTCTGGATTGCCTACTCTGAAACCTCCTCCAGGGAGGGTGGGAACCACCACTTCTGGATTGCCTCCTCTAAAACCTCCTCCCGGGAGGATTGGACCTGCCACTTCTGGATTGCCTCCTCTAAAAACTCCTCCAGGTAGACTGAACCCCCTTCCTCCTGAACCACCTTTTAGACCTGATAATGCTGCTGCTCCTCCACCTCCTGCATCTTCACAACCTGTGAAATCTCACTCTGATGCTGGTGGGGTTCCAACTCCAGGACCTCCTCCACCTCCTGCACCTCCACAACCCGTGAAACATCATTCTAATGTTGGTGGAGCTTCGCCTCCTGGACCTCCACCACCACCACCAGTGCCACCTGGTGCCCGAGCAGGTGTTCATCCACCACCTCCTCCTCCTCCTAAGGGCGGTGTAGCCCCACCACGACCTCCTCCACCTATCGGTCCAAAAATATCTCCACAGAATGCAGCAGCTGGTTCAGAAGGTGGAGCCCATGCTCCTAAAGCCAAGCTAAAACCTTTTTTCTGGGATAAGGTCCAAGCCAACTCAGATCATTCAATGGTCTGGAATCAGATTAAATCAGGATCATTCCAGTTTAATGAAGAGATGATAGAGACTCTTTTTGGCTTTAGTAATATGGATAAACACAAAGGTGAACCAAAGAAAGAGTCATCATCCCAAGACCCTGCAACTCGGTATATTGAGATAATTGACAGGAAAAAAGCACAAAATCTGTTGATTTTGCTGCGACCCTTGAACATCACTACAGAAGAAGTTTGTGACGCACTTCATCAGGGAAATGAGCTTCCTTCAGAATTTCTGCAAACCATGTTGAAGATGGCACCAACATCAGAGGAAGAACTTAAGCTTAGACTTTTCAGTGGTGAAATATCCCAACTTGGGCCTGCAGACCGATTCATAAAAGCTTTGGTTGACATTCCATTTGCTTTTAAACGAATGGAAGCGTTGCTTTTCATGAGTACTTTTCAAGAGGATCTCACTGCTACTAAGGAGTGCTTTACAACTTTAGAGGTTGCGTGTAAGGAGTTAAGAAGCAGTCGGCTGTTCCTTAAGCTTCTAGAAGCTGTCCTGAAAACTGGAAACCGGATGAATGATGGTACATATCGTGGTGGTGCACAAGCATTTAAACTTGATACATTACTGAAATTGTCTGATGTGAAAGGAACGGATGGCAAGACCACACTCTTACATTTTGTAGTCCAAGAGATAGTCCGCTCTGAGGGCAAAAGAGCTGTTCGACTGGAAAAAGAAAGCCAGAGTTCGTCAGATATTAAAAAAGATGGCCGTCCTGAGAATGTATCTGTTGAAACTGAAGAACACTATCATGATCTTGGTCTTCAGGCGGTTTCACATTTGAGCAGCGAACTAGAGAATGTTAAGAAAGCATCAGTTATTGACGCAGACAGCTTAACAGGAACTGCTGCCAAACTTGGCCATGGTCTTCTTAAAATCAGAAATTTTGTGAACATTGACTTTAAGAGCATAGAAGAAGATAGAGAATTTTGCCAGGCAGTGAAGGCTTTTGTGCAGGATGCTGAGAATGATGTCACTAGTCTGCTGGAAGAAGAGAAGAGAATCATGGCTCTGGCGAAGAGCACTGGGGATTATTTTCACGGGAAAGCTGGGAAAGATGAAGGATTGCGGTTGTTTGTGATTGTACGGGACTTTTTGATGATGCTAGATAAGGTGTGCAAGGAGGTGAAAGACGCCCAGAAGAAGCAACCAAAAGCTCAAAAGCAAGAGGCGCCTAAAGCACCATCTTCTACCTCAGATGTTCGTTCACCACCTGATTATCGTCAGCTGCTATTTCCTGCAATCGCAGATAGGCGGGTGAAAGACGATAGTTCAGACGATGAGAATGAACCTTGA 2979 0.4502 MAIRRILSVATVTFCVLLFLLLTSAGNLKESEETRTDFLSQLLDPSSSGLLLDDNTAEQIWSSCWVDLIQLKGGAEDLVVWFPQEPSRSTDENSEFRYLLRENIQKLINAHHPQLKQTFLHCLRQNGLPLHVSGEEAESKTWHASFIESTFSRSSILRRNLAQESPQHIPLAPSPGPSVMSPAPNPGPSLVPVTSPAISQAPESGHPSSSPETPFFRQLDPPATGDTTAQPSSVTDTQANKKSNHERTVVLAVVITALVTFVIAALLFLCCSRFYRTGRGKQNDERPLLSLSMGDYSIGSSRYPFGNSIKEEKVGFQSSSNNTDDHKKISSAYTNSQVSTNILHTTVQEAQSVGAVGVAEGTTTSGLPTLKPPPGRVGTTTSGLPPLKPPPGRIGPATSGLPPLKTPPGRLNPLPPEPPFRPDNAAAPPPPASSQPVKSHSDAGGVPTPGPPPPPAPPQPVKHHSNVGGASPPGPPPPPPVPPGARAGVHPPPPPPPKGGVAPPRPPPPIGPKISPQNAAAGSEGGAHAPKAKLKPFFWDKVQANSDHSMVWNQIKSGSFQFNEEMIETLFGFSNMDKHKGEPKKESSSQDPATRYIEIIDRKKAQNLLILLRPLNITTEEVCDALHQGNELPSEFLQTMLKMAPTSEEELKLRLFSGEISQLGPADRFIKALVDIPFAFKRMEALLFMSTFQEDLTATKECFTTLEVACKELRSSRLFLKLLEAVLKTGNRMNDGTYRGGAQAFKLDTLLKLSDVKGTDGKTTLLHFVVQEIVRSEGKRAVRLEKESQSSSDIKKDGRPENVSVETEEHYHDLGLQAVSHLSSELENVKKASVIDADSLTGTAAKLGHGLLKIRNFVNIDFKSIEEDREFCQAVKAFVQDAENDVTSLLEEEKRIMALAKSTGDYFHGKAGKDEGLRLFVIVRDFLMMLDKVCKEVKDAQKKQPKAQKQEAPKAPSSTSDVRSPPDYRQLLFPAIADRRVKDDSSDDENEP 992
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi01g0560 992 MobiDBLite consensus disorder prediction 940 968 - -
Mibi01g0560 992 MobiDBLite consensus disorder prediction 192 215 - -
Mibi01g0560 992 SUPERFAMILY Formin homology 2 domain (FH2 domain) 492 948 - -
Mibi01g0560 992 MobiDBLite consensus disorder prediction 784 803 - -
Mibi01g0560 992 ProSiteProfiles Formin homology-2 (FH2) domain profile. 524 956 IPR015425 -
Mibi01g0560 992 MobiDBLite consensus disorder prediction 223 239 - -
Mibi01g0560 992 MobiDBLite consensus disorder prediction 360 529 - -
Mibi01g0560 992 Gene3D Formin, FH2 domain 529 963 IPR042201 -
Mibi01g0560 992 PANTHER FORMIN-RELATED 23 979 IPR027643 GO:0003779|GO:0030036|GO:0045010|GO:0051015
Mibi01g0560 992 MobiDBLite consensus disorder prediction 446 461 - -
Mibi01g0560 992 MobiDBLite consensus disorder prediction 470 514 - -
Mibi01g0560 992 MobiDBLite consensus disorder prediction 384 435 - -
Mibi01g0560 992 MobiDBLite consensus disorder prediction 951 965 - -
Mibi01g0560 992 SMART it6_source 524 944 IPR015425 -
Mibi01g0560 992 MobiDBLite consensus disorder prediction 170 191 - -
Mibi01g0560 992 Pfam Formin Homology 2 Domain 528 930 IPR015425 -
Mibi01g0560 992 MobiDBLite consensus disorder prediction 167 243 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi01g0560 Mibi-ChrMibi01 5239745 5244947 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi01g0560 490 937 FH2 protein (formin) Gene Family AT3G25500 45.852 2.50e-119 389
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi01g0560 01 5239745 5244947 Mibi07g0855 07 11134218 11140373 CCT
Mibi01g0560 01 5239745 5244947 Mibi01g0560 01 5239745 5244947 ECH