Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi01g0557 ATGGTTGGCCCGGAAAACTCCAATTGGCTCTTCGATTATGGTTTAATTGACGATATTACTGTCCCCGATGATAGCTTTACTATACCTGCTTCTGGGTTTAGCTGGCCGGCTCAGGCCTTGAATGGTTCTTCCAATATCAGTGCTGAAATTGATGGCACGTTGGGGGATGCTGATGGTGTTAAAGAGTCTGGTTCAAAGAAGAGGGGTAGACCTGAGTCATGTTCTGCTTCTAGTTCAAAGGCGTGTCGGGAAAAGATGAGGAGGGACAGGCTGAATGACAAGTTTCTTGAATTAGGCTCTATTTTGGAGCCTGGAAGGCCTTCCAAAACAGACAAGGCTGCTATTCTGGTTGATGCTGTTCGAGTGGTGACACAATTACGGGGTGAAGCCGAGAAGTTGAAAGACTCAAATACGAATCTTCAAGAGAAGATTAAAGAGTTGAAGGCCGAGAAGAACGAACTACGAGATGAGAAACAGAGGCTCAAGGCTGAGAAAGAAAAGTTGGAGCAGCAGTTGAAATCTATCAACGCTCAACCTGGTTTCATGCCTGCCCCTCCTGCAATCCCTGCTGCATTTGCTGCTCAAGGCCAAGCCCCTGGCAGCAAGTTGGTCCCTTTTATGAGTTATCCAGGAGTTGCCATGTGGCAATTTATGCCTCCAGCTGCTGTGGATACTTCACAGGACCATGTGCTCCGTCCACCAGTTGCCTAA 711 0.4768 MVGPENSNWLFDYGLIDDITVPDDSFTIPASGFSWPAQALNGSSNISAEIDGTLGDADGVKESGSKKRGRPESCSASSSKACREKMRRDRLNDKFLELGSILEPGRPSKTDKAAILVDAVRVVTQLRGEAEKLKDSNTNLQEKIKELKAEKNELRDEKQRLKAEKEKLEQQLKSINAQPGFMPAPPAIPAAFAAQGQAPGSKLVPFMSYPGVAMWQFMPPAAVDTSQDHVLRPPVA 236
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi01g0557 236 CDD bHLH_AtILR3_like 83 155 - -
Mibi01g0557 236 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 75 126 IPR011598 GO:0046983
Mibi01g0557 236 Gene3D - 78 154 IPR036638 GO:0046983
Mibi01g0557 236 SMART finulus 81 132 IPR011598 GO:0046983
Mibi01g0557 236 PANTHER BHLH TRANSCRIPTION FACTOR 5 236 IPR044818 GO:0003700|GO:0006355|GO:0046983|GO:0055072
Mibi01g0557 236 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 66 141 IPR036638 GO:0046983
Mibi01g0557 236 FunFam Transcription factor bHLH34 66 124 - -
Mibi01g0557 236 Coils Coil 123 178 - -
Mibi01g0557 236 Pfam Helix-loop-helix DNA-binding domain 79 126 IPR011598 GO:0046983
Mibi01g0557 236 MobiDBLite consensus disorder prediction 51 86 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi01g0557 Mibi-ChrMibi01 5214652 5217012 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi01g0557 1 236 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G54680 74.477 7.02e-121 342
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Mibi01g0557 HLH 1.2e-09 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi01g0557 01 5214652 5217012 Mibi01g0557 01 5214652 5217012 ECH