Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi01g0552 ATGGGAAAGAAAAGCATGTTTCGTTACTCAGATACAGTGGACAAGTTGCTGATGCTGTTTGGTACTCTGGGAAGTTTTGGAGATGGGATACAAATGCCTCTCATGATGTTCATTCTTAGTAATGTAATTAATGCCTATGGAGACTCCAAGAATGTTTTGACAAAGCTAGATGTAAATAAGTATGCTTTAAGGCTTTTATATGCTGCAATTGGATCTGGACGTTCAGCTTTTGTTGAAGGAATATGTTGGACAAGAACTGCAGAGAGACAAACTTCAAGAATGAGAATAGAATACCTGAAATCAGTACTTAGACAAGAAGTCGGTTTCTTTGACACACAGGAAGTAGGTTCTTCAACAACCTACCAAGTTACCTCCCTCATAACTGTTGATGCCAACGCAATTCAAGATGCTTTAAGTGAAAAGATACCAACCTGCTTGGCAAACATGTCCACAATTTTATCCTGCCACGTCTTTGCATTTATACTGTCATGGAGACTAACATTGGCAGCTATCCCAATCACAGTCATGTTCATTGTTCCAGCACTTGTATTTGGGAAGATCATGATGGACCTAGCAATGAAAATGATTGAAACTTATGGGGTTGCTGGTGGGATTGCAGAACAAGCAATATCATCAATAAGAACTGTCTATTCATATGTGGGGGAGAACCAAACACTGAACAGATTTAGCAGTGCCCTTGAGGAAACAATGGAATTGGGAATAAAACAGGGTTTTGCAAAGGGTCTAATGTTAGGTAGCCTAGGGATTTTATACATTGGTTGGGGCTTTCTAGCTTGGATTGGTACTATCTTGATCACTAAGAAAGGAGAGCAGGGTGGCCACGTTTTCGTGGCCGGTGGTTCGGGCAAGTCCACCATAATTTCTTTACTGGAGAGATTTTATGAACCTGTTGAGGGAGAAATATTCTTGGATGGCCACAAGATCAATAGACTTGAGATGAAATGGTTGAGATCTCAACTTGGCCTGGTAAATCAAGAACCTGTTCTTTTTGCCACAACCATAAAAGAGAATATATTGTTTGGAAAAGAAGGAGCCTCCACGGAAAATGTGATAACTGCAGCTAAAGCAGCAAATGCACATGATTTCATCATCAATTTACCAGACGGATATGAAACCCAATTCGGATGTCAATTATCTGGAGGCCAAAAGCAGCGAATTGCGACAGCAAGAGCTTTGCTCAGGGATCCAAAAGTTCTGCTTCTTGATGAAGCTACTAGTGCACTAGACGCACAATCAGAAAGAGCAGTACAAGCAGCAATTGAACAAGCTTCAAGAGGAAGGACTACTATCATAATTGCTCACCGTTCGTCTACAATACAATCTGCCCACATTATTGCATTTCTTCAAGCTGGCAGAGTCACTGAATCAGGTGCCCATAATGAGCTCATGGAAATGAACAATGCCCAAGGCGGGGAATATGCAAGGATGGTAGAGTTGCAGCAAGTAAGAATAGTGAATGAAGATCCCCAAAATTCCAATCTTGAAACAGATGGAAGGAATCAACACCAGAAGATAAGCATCCCAACAAGCCCAGTTAGTATCAGATCAAGCACTCCGGGTAGCCCAACTTCCATGGGCACACCCTACTCCTTCTCCCTCCAACATGATTCTGAAGATGATTTTACTGAAGATTTCTTCAAGATATCAACTTATCCAGCTCCTTCCAACTGGAGTTTGTTGGAGACGAATGCACCTGAGTGGAGAAGAACAATGCTTGGATGTTTGGGCGCACTAGGCTCTGCAGCAGTACAACCAATAAATGCATATTACGTGGGAGTACTTATATCAATTTATTTTGACAGTGAAACCTCAAAGACCAAGTCCAAAACTAGAGTCTTGGCTCTTACTTTCCTAGGAATCGGTGTTTTCAACTTCCTCACGAGTCTTCTTCAACACCATAGTTTTGCTGTTATGGGAGAAAAGCTGACTAAAAGAATACGAGAAAATTTAGTGGGAAAATTGTTGACTTTTGAGATAGGGTGGTTTGATGATGAAGAGAACACAAGCGCAGCGATTTGTGCAAGACTAGCCTCTGAAGCTAACATGGTGCGCTCCCTTGTTGGAGATCGTTTGTCATTATTGGCCCAAGCAATATTTGGATCTATCTTTGCTTATGCTCTTGCATTGGTGCTTACATGGAGGCTGTCCCTTGTGATGATTTCTGTACAACAATTAGTCATTGGGAGCTTTTATTCAAGAAGTGTCTTGATGAAGACGATGGCGAAAAAGGCCCGAAAAGCACAAAATGAAGGAAGCCAACTCGCAAGTGAAGCTGTGAAAAACCACAGAACTATAACTGCCTTCAGCTCTCAGAAAAGAATGTTATCCCTTTTCAAATCCACATTGGTAGGTCCTCAAAAGGAGAACATTAGGCAGTCATGGATTTCAGGCTTTGGTCTTCTTTGCTCACAATTCTTCAACACCGCGGCAACAGCTTTAGCTTACTGGTATGGAGGAAGGCTCTTGATTGAAGGGCTCATAGAACCAACACATCTATTTCAAGCATTTTTTATATTGTTCTTCAGTGCTTATATTATTGCAGAAGCTGGAAGCATGACTTCTGACTTATCTAAAGGAAGCAGTGCAGTTCAATCAGTGTTTGCAATCTTGGACAGAAAAAGTGAGATTGATCCTGAGAGCATAGGGGCAGTAAGTATAAAGAATAAACTAAGGGGTGAAGTGGAACTTAAAAGTGTTTTCTTTGCCTATCCAACTAGACCAGAGCAAATGATTTTCAAGGGTCTATGTCTTAAAGTTGATGCAGGCAAAACAGTAGCACTAGTCGGACAAAGTGGTTGTGGCAAATCAACTATTATTGCTCTTATTGAAAGGTTTTATGACCCAATGAATGGAACAGTGTGCATAGATGAACAAGACATCAAGTCATATAATTTGAGAGAGCTAAGGTCGCATATTGGCCTTGTAAGTCAGGAGCCCACCCTTTTTGCTGGAACCATTCAAGAAAACATTGTCTATGGGAAAGAGAATGCAACTGAAACTGAGATAAGAAAGGCTGCATCTGTGGCTAATGCTCATGAATTTATAAGTGGAATGAAAGATAGGTATGAGACATATTGTGGAGAAAGAGGGGTTCAACTATCAGGAGGTCAAAAACAGAGGATAGCATTAGCACGTGCGATATTGAAGGATCCTGCAATCTTATTGCTAGATGAAGCTACAAGTGCACTTGATAGTGCGTCAGAGAAGTTGGTTCAAGAAGCACTAGAAAAGATGATGGTCAGAAGAACATGCATAGTTGTGGCTCACAGGCTATCTACCATACAGAAATGA 3312 0.4112 MGKKSMFRYSDTVDKLLMLFGTLGSFGDGIQMPLMMFILSNVINAYGDSKNVLTKLDVNKYALRLLYAAIGSGRSAFVEGICWTRTAERQTSRMRIEYLKSVLRQEVGFFDTQEVGSSTTYQVTSLITVDANAIQDALSEKIPTCLANMSTILSCHVFAFILSWRLTLAAIPITVMFIVPALVFGKIMMDLAMKMIETYGVAGGIAEQAISSIRTVYSYVGENQTLNRFSSALEETMELGIKQGFAKGLMLGSLGILYIGWGFLAWIGTILITKKGEQGGHVFVAGGSGKSTIISLLERFYEPVEGEIFLDGHKINRLEMKWLRSQLGLVNQEPVLFATTIKENILFGKEGASTENVITAAKAANAHDFIINLPDGYETQFGCQLSGGQKQRIATARALLRDPKVLLLDEATSALDAQSERAVQAAIEQASRGRTTIIIAHRSSTIQSAHIIAFLQAGRVTESGAHNELMEMNNAQGGEYARMVELQQVRIVNEDPQNSNLETDGRNQHQKISIPTSPVSIRSSTPGSPTSMGTPYSFSLQHDSEDDFTEDFFKISTYPAPSNWSLLETNAPEWRRTMLGCLGALGSAAVQPINAYYVGVLISIYFDSETSKTKSKTRVLALTFLGIGVFNFLTSLLQHHSFAVMGEKLTKRIRENLVGKLLTFEIGWFDDEENTSAAICARLASEANMVRSLVGDRLSLLAQAIFGSIFAYALALVLTWRLSLVMISVQQLVIGSFYSRSVLMKTMAKKARKAQNEGSQLASEAVKNHRTITAFSSQKRMLSLFKSTLVGPQKENIRQSWISGFGLLCSQFFNTAATALAYWYGGRLLIEGLIEPTHLFQAFFILFFSAYIIAEAGSMTSDLSKGSSAVQSVFAILDRKSEIDPESIGAVSIKNKLRGEVELKSVFFAYPTRPEQMIFKGLCLKVDAGKTVALVGQSGCGKSTIIALIERFYDPMNGTVCIDEQDIKSYNLRELRSHIGLVSQEPTLFAGTIQENIVYGKENATETEIRKAASVANAHEFISGMKDRYETYCGERGVQLSGGQKQRIALARAILKDPAILLLDEATSALDSASEKLVQEALEKMMVRRTCIVVAHRLSTIQK 1103
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi01g0552 1103 Gene3D - 287 488 IPR027417 -
Mibi01g0552 1103 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 19 285 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Mibi01g0552 1103 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 901 1101 IPR003439 GO:0005524
Mibi01g0552 1103 CDD ABC_MTABC3_MDL1_MDL2 901 1103 - -
Mibi01g0552 1103 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 251 482 IPR003439 GO:0005524
Mibi01g0552 1103 ProSitePatterns ABC transporters family signature. 1040 1054 IPR017871 GO:0005524|GO:0016887
Mibi01g0552 1103 SUPERFAMILY ABC transporter transmembrane region 566 884 IPR036640 GO:0005524|GO:0016020
Mibi01g0552 1103 MobiDBLite consensus disorder prediction 496 536 - -
Mibi01g0552 1103 Gene3D - 888 1103 IPR027417 -
Mibi01g0552 1103 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 896 1102 IPR027417 -
Mibi01g0552 1103 CDD ABC_6TM_Pgp_ABCB1_D1_like 18 285 - -
Mibi01g0552 1103 Pfam ABC transporter 920 1068 IPR003439 GO:0005524
Mibi01g0552 1103 CDD ABC_6TM_Pgp_ABCB1_D2_like 570 883 - -
Mibi01g0552 1103 PANTHER ABC TRANSPORTER B FAMILY 577 1102 - -
Mibi01g0552 1103 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 285 487 IPR027417 -
Mibi01g0552 1103 SUPERFAMILY ABC transporter transmembrane region 4 283 IPR036640 GO:0005524|GO:0016020
Mibi01g0552 1103 FunFam ABC multidrug transporter SitT 271 489 - -
Mibi01g0552 1103 Gene3D ABC transporter type 1, transmembrane domain 550 887 IPR036640 GO:0005524|GO:0016020
Mibi01g0552 1103 Gene3D ABC transporter type 1, transmembrane domain 5 284 IPR036640 GO:0005524|GO:0016020
Mibi01g0552 1103 FunFam ABC transporter B family member 1 891 1103 - -
Mibi01g0552 1103 Coils Coil 1063 1083 - -
Mibi01g0552 1103 Pfam ABC transporter transmembrane region 18 276 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Mibi01g0552 1103 Pfam ABC transporter transmembrane region 578 850 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Mibi01g0552 1103 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 579 865 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Mibi01g0552 1103 Pfam ABC transporter 287 413 IPR003439 GO:0005524
Mibi01g0552 1103 SMART AAA_5 928 1100 IPR003593 -
Mibi01g0552 1103 SMART AAA_5 278 458 IPR003593 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi01g0552 Mibi-ChrMibi01 5158770 5163294 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi01g0552 287 488 Calmodulin-binding Proteins AT2G36910 53.659 4.44e-61 226