Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi01g0538 ATGGATATCTTCAATTATGGATTGGACATCGTAGGCCCTTCATCCAGAACAAACATCAACAACAAAGGAAAAAATCATGAACGCCGCCATTATTATCATCTTGATGAAGATGATCATGACGATGATAACATAACACGGAAAACTTTCAAATGCAGCTTTTGCATGAGAGAGTTTTCTTGCCCACAGGCCTTAGGAGGCCATCAAAATGGGCACAAACAAGAGCGTGCAATAGCAAAACAACGACAAGCTAGGATTATTTCTGATAATCATTTTGGTGTTTTAGAGCATAACTATTCTCCACACTTTCCTTACTATTATCCTCAACATAATTATGGCCCTTTCAGCTATAATAGGCCATCAGGGGTTAAATTGGAGCCCATGACTTTTAGTCCTTCTTACAATCCTAGTTTTAGATTCAAGCATGATCATCAAACCCTACATATAGATAGGCTTATTAGGGAAAGTCCAGGAACTTCAAGGGTTAACGAAATTGGTAACATCGCTCCTGTAACTTATCAATTTTTTCCTCCTTCTTCAGCTACTACTGGTGATACTACAATTGGTGATCACTGTATCAAGTCTACACCAGTAATAGATTTAACAGAGGATGATGATAGTCCTGATTCTTCTGGTCTTGATTTGACACTTAGGCTTTAA 657 0.3805 MDIFNYGLDIVGPSSRTNINNKGKNHERRHYYHLDEDDHDDDNITRKTFKCSFCMREFSCPQALGGHQNGHKQERAIAKQRQARIISDNHFGVLEHNYSPHFPYYYPQHNYGPFSYNRPSGVKLEPMTFSPSYNPSFRFKHDHQTLHIDRLIRESPGTSRVNEIGNIAPVTYQFFPPSSATTGDTTIGDHCIKSTPVIDLTEDDDSPDSSGLDLTLRL 218
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi01g0538 218 SUPERFAMILY beta-beta-alpha zinc fingers 46 77 IPR036236 -
Mibi01g0538 218 ProSitePatterns Zinc finger C2H2 type domain signature. 51 71 IPR013087 -
Mibi01g0538 218 Gene3D Classic Zinc Finger 21 97 - -
Mibi01g0538 218 PANTHER C2H2 AND C2HC ZINC FINGERS SUPERFAMILY PROTEIN 38 218 IPR044246 GO:0009788
Mibi01g0538 218 MobiDBLite consensus disorder prediction 199 218 - -
Mibi01g0538 218 ProSiteProfiles Zinc finger C2H2 type domain profile. 49 76 IPR013087 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi01g0538 Mibi-ChrMibi01 5057509 5058165 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi01g0538 24 82 C2H2 Transcription Factor Family AT5G01860 44.068 2.37e-12 62.0