Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi01g0536 ATGCACAGAAATTCCAACAATTTCACACCTTTACCTGGTGCTCGGCGATCTGTTTTAAGAGCCTATGATAACCATAGAAGCTACGATGAGACGCCTATGTTTCTCCAATCTCTTTCTATCCAACCTACTCCTGATGACAGGATTTCAGGCGTGCAAGATATCCCAAGGTTGATGGAAGGCAGAACAGTTTCAGGAATCAACCGCACTCCCAGTTTCCCAACACAACCACATCGTAGACAACAAATTAATGGATTCAATGGGAGCTTCAGAAGGGTGTTGGGAGAGATTGTGCAGCAGCCACCTCCAAGAACTGCAGAAAATCCCAATCCAGCACTTTTGAGCAAGCTTAAGAGAGAAAGATATGAGCCCCCAAAGATTTTACCAAAGAGAGTGAGTTTATGTTATAGAGACAGCGTTGCGAATGCTTTAAAAGAGAGAGACAGGGAAAAGCAAGAACGTCGCAAGAGGTGTGCTATTTGCTTGGAAGATTTTGAACCTCGGGAGGAGGTGATGCTCACACCCTGCAAACATGTGTTTCATGAGGATTGTGTAGTTCCATGGGTAAGAAGCAAAGGCCAGTGCCCTGTTTGTAGGTTTGTGATTTGTGAGGAGGCAAGAGAGAACACTTCATCCTTCAACGACAATATGGCCGTGATGGAACCCAGTGATCTTCTAATTTCAGGAGAGCTTCTATCAATTTTCACAGCCATGCAAGAAGCTCTCGAAATGGGCAATGGAACTCTGTAA 747 0.4471 MHRNSNNFTPLPGARRSVLRAYDNHRSYDETPMFLQSLSIQPTPDDRISGVQDIPRLMEGRTVSGINRTPSFPTQPHRRQQINGFNGSFRRVLGEIVQQPPPRTAENPNPALLSKLKRERYEPPKILPKRVSLCYRDSVANALKERDREKQERRKRCAICLEDFEPREEVMLTPCKHVFHEDCVVPWVRSKGQCPVCRFVICEEARENTSSFNDNMAVMEPSDLLISGELLSIFTAMQEALEMGNGTL 248
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi01g0536 248 PANTHER RING FINGER AND PROTEASE ASSOCIATED DOMAIN-CONTAINING 78 199 - -
Mibi01g0536 248 SUPERFAMILY RING/U-box 156 204 - -
Mibi01g0536 248 SMART ringv_2 156 198 IPR011016 GO:0008270
Mibi01g0536 248 SMART ring_2 157 197 IPR001841 -
Mibi01g0536 248 FunFam RING/U-box superfamily protein 141 215 - -
Mibi01g0536 248 Pfam Ring finger domain 156 198 IPR001841 -
Mibi01g0536 248 ProSiteProfiles Zinc finger RING-type profile. 157 198 IPR001841 -
Mibi01g0536 248 CDD RING-H2_PA-TM-RING 157 198 - -
Mibi01g0536 248 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 141 215 IPR013083 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi01g0536 Mibi-ChrMibi01 5042756 5043713 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi01g0536 107 245 C3H Transcription Factor Family AT3G58720 43.836 2.77e-35 124