Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi01g0535 ATGTTGGGTCTGGAGTATCAGTCAAAGAGGGGCTACTTAGGACTGGAATATTACAGAAGGACTATAAGTATTAAGATTATACCAGTTGGGGTTCATATGGATCGTATTAAAACAGTCATGAGAATGGCAGATGAAGAGTCTAAATTGAAACAACAATTTGAAGGAAAAACTGTATTGCTTGGTGTTGATGATATGGACATTTTTAAAGGTATTGATTTGAAGATTTTGGCTATGGAGCGGATGGCTGGGGCTATCCGTGTTAATCCATGGAATGTTGAAACAACTGCTGAGGCAATGAATGAGGCCATCTCAATGGCTGATGGAGAGAAGCAGTTGCGGCATGAAAAGCATTATCGGTATGCTAGCACTCATGATGTGGCTTATTGGTCACGTAGTTTCTTGCATGATATGGAGAGAGCTTGCACAAACCTTCTGCGGAAAAGATGTTGGGGAATAGGTCTTAGCTTTGGATTCAGAGTTGTCGCACTTGATCCTAATTTTAGAAAGCTTTCCATTGATGCTATGGTTTCAGCTTACAAGAGGCAAAGAGCAGGGCCATTTTGTTGGACTATGATGGCACTGTTATGCCGCAGAACTCTATTAACAAGAGTCCAATTCCAGAGAATTGCTGTTGTTACTATTTGGCAATCTGGACTGTATAATATCTTTTCATCAATGGATGTACAAGGGAAACAGGCAGACTTTGTTCTGTGTGTTGGTGATGGCCGATCAGATGAGGATATGTTTCAAATAATCAGTAGTGCTATCTCTAGAAATATATTTTCTGCCAATTGTTCCACATTCGCTTGCACAGTTGGACAAAAACAGAGTAAAGCTAAGCATTATTTGGATGATACGATTGAAGTTATTAGCATGCGAGAATCTTTAGCTGAAGAATCTGATTCTGCTTAG 912 0.398 MLGLEYQSKRGYLGLEYYRRTISIKIIPVGVHMDRIKTVMRMADEESKLKQQFEGKTVLLGVDDMDIFKGIDLKILAMERMAGAIRVNPWNVETTAEAMNEAISMADGEKQLRHEKHYRYASTHDVAYWSRSFLHDMERACTNLLRKRCWGIGLSFGFRVVALDPNFRKLSIDAMVSAYKRQRAGPFCWTMMALLCRRTLLTRVQFQRIAVVTIWQSGLYNIFSSMDVQGKQADFVLCVGDGRSDEDMFQIISSAISRNIFSANCSTFACTVGQKQSKAKHYLDDTIEVISMRESLAEESDSA 303
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi01g0535 303 Pfam Glycosyltransferase family 20 1 81 IPR001830 GO:0003824|GO:0005992
Mibi01g0535 303 Pfam Glycosyltransferase family 20 83 138 IPR001830 GO:0003824|GO:0005992
Mibi01g0535 303 Gene3D Glycogen Phosphorylase B; 124 135 - -
Mibi01g0535 303 Gene3D Glycogen Phosphorylase B; 15 32 - -
Mibi01g0535 303 FunFam Alpha,alpha-trehalose-phosphate synthase [UDP-forming] 6 216 303 - -
Mibi01g0535 303 PANTHER TREHALOSE-6-PHOSPHATE SYNTHASE 1 81 IPR001830 GO:0003824|GO:0005992
Mibi01g0535 303 SUPERFAMILY HAD-like 236 296 IPR036412 -
Mibi01g0535 303 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 2 81 - -
Mibi01g0535 303 Gene3D - 207 303 IPR023214 -
Mibi01g0535 303 Pfam Trehalose-phosphatase 221 285 IPR003337 GO:0003824|GO:0005992
Mibi01g0535 303 Gene3D Glycogen Phosphorylase B; 80 123 - -
Mibi01g0535 303 Gene3D Glycogen Phosphorylase B; 33 79 - -
Mibi01g0535 303 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 82 141 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi01g0535 Mibi-ChrMibi01 5038882 5042190 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi01g0535 1 89 Trehalose Biosynthesis Gene Families AT1G06410 67.391 1.58e-33 128