Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi01g0530 ATGGGGACGCATTATGGGTATATAAGGAAGGCGCAGATTGCAGTAATCGCCATTACAGTGCTTACTTCTCTAGCTCTGATCGCATCACTAGTTGCCCTTATTTACTTTTGCTACAGAAGGATCAAGGTTTACAATCGCCGTAAGAACCACTCCATGATTTCTTTTATCTATACTTCTTCTTACTTAGATGTTGGTCAAAACAAGGGAAGTGACTTTGCAAATCTGCAAGTTGTTGCTGATAATGGGCATCAAATGTTCACTTACAAGCAGTTGCATTCTGCAACCAATGGCTTTAGAAAGTCCAATGTAATTGGCAATGGCGGATTCGGGCTTGTCTACCGAGGAGTGTTAAGCAGTGGCAGGAATGTTGCAATTAAATTCATGGATGAGGCACGAAAGCAAGGGGAAGAAGAATTTAGAGTAGAGGTGGAATTGCTGGGTCAGTTGCACTGTCCATATTTGCTGAAATTGCTTGGGCATTGCTCTGACAGTAATAATAAATTGCTGGTTTATGAGTTCATGGAAAATGGGAGTCTGCAAGAACATCTTTATCCTGTGAGCAATTATTATATCACACCCATGAAGTTGGATTGGAATTCTCGAATAATAATAGCCCTAGAGGCTGCTAAGGGTTTGGAATATCTTCATGAACATGTGAATCCCCCAGTTATACATAGAGACTTTAAGAGCAGCAACATCCTCTTAGACAAACAATTTCATGCAAAAGTTTCTGACTTTGGATTAGCCAAGCTTGGATCTGATAAAGCTGGAGGACATGTTTCCACTCGAGTTTTGGGCACACACGGATATGTTGCCCCTGAATATGCACTAACCGGGCACTTAACAATCAAATCAGATGTATACAGGGAAGGCGTTCTTGTATCTTGGGCCTTGCCCCTACTGAATGATAGAGGAAATGTTGCAAAGATTATGGATCCTATACTGGAAGGTCAATACTCAATGAAAGAAGTGATCCAGGTAGCCGCCATTGCTGCACAGTGTGTACAACCAGAGGCAGATTATAGGCCTCTCATGGCAGACGTTGTGCAATCATTGGCTCCACTGGTGAAGAAGACGACCCACAGGCCAACAACCTCAAAGGTTGGTAACTACCCAAGTTTCCATGGCAACAAGTTATCTCCACCTCAGGATTTACTCAAAGTAACTATGTAG 1173 0.4246 MGTHYGYIRKAQIAVIAITVLTSLALIASLVALIYFCYRRIKVYNRRKNHSMISFIYTSSYLDVGQNKGSDFANLQVVADNGHQMFTYKQLHSATNGFRKSNVIGNGGFGLVYRGVLSSGRNVAIKFMDEARKQGEEEFRVEVELLGQLHCPYLLKLLGHCSDSNNKLLVYEFMENGSLQEHLYPVSNYYITPMKLDWNSRIIIALEAAKGLEYLHEHVNPPVIHRDFKSSNILLDKQFHAKVSDFGLAKLGSDKAGGHVSTRVLGTHGYVAPEYALTGHLTIKSDVYREGVLVSWALPLLNDRGNVAKIMDPILEGQYSMKEVIQVAAIAAQCVQPEADYRPLMADVVQSLAPLVKKTTHRPTTSKVGNYPSFHGNKLSPPQDLLKVTM 390
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi01g0530 390 Gene3D Transferase(Phosphotransferase) domain 1 174 371 - -
Mibi01g0530 390 ProSitePatterns Serine/Threonine protein kinases active-site signature. 223 235 IPR008271 GO:0004672|GO:0006468
Mibi01g0530 390 FunFam Os07g0541700 protein 174 267 - -
Mibi01g0530 390 SUPERFAMILY Protein kinase-like (PK-like) 78 352 IPR011009 -
Mibi01g0530 390 Pfam Protein kinase domain 99 297 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi01g0530 390 FunFam serine/threonine-protein kinase PBS1-like 66 173 - -
Mibi01g0530 390 ProSiteProfiles Protein kinase domain profile. 98 356 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi01g0530 390 ProSitePatterns Protein kinases ATP-binding region signature. 104 126 IPR017441 GO:0005524
Mibi01g0530 390 MobiDBLite consensus disorder prediction 359 380 - -
Mibi01g0530 390 Gene3D Phosphorylase Kinase; domain 1 62 173 - -
Mibi01g0530 390 MobiDBLite consensus disorder prediction 359 377 - -
Mibi01g0530 390 PANTHER OS07G0668900 PROTEIN 290 364 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi01g0530 Mibi-ChrMibi01 5006030 5008173 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi01g0530 1 381 Receptor kinase-like Gene Family AT3G58690 61.787 3.23e-166 469
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_Extensin Mibi01g0530 Pkinase 1.4e-37 CL0016