Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi01g0526 ATGGCGGAGAATAATATATACTACATATCTGACGAGGAGGACGACAAGAGCGAAGAAGGCAGTGAATTGGAAGGGAGAGTTTATAAGAAGAAGCGTTCATTGTTGGACTTGAATGAAGAAGCGGTGGGTGATGATGATAGATCATCTCAAGAAGAAGGGAATGTGAGCAGCAATAATAACTCATCAAGCACAGATCAAGTGATGAGAGAAAGAACAACGACAACGAGTGTGAGGCAATATGTGAGGTCCAAAATGCCAAGGCTTCGTTGGACTCCTGATCTCCATCTTGCTTTTGTTCTTGCTGTTGAGAGGCTTGGTGGCCAAGAAAGAGCAACTCCCAAGTTGGTTCTTCAACTGATGAATGTGAGGGGACTTAGCATTGCGCATGTTAAAAGTCATTTGCAGATGTACCGAAGTAAAAAGCTTGATGAGTCTGGCCAAGTCATGTCTCAAAATAGGGGAATGCAAGGAAGGGCAAACATTGTGGAGACTTACGAAAGATATAATAAAGCCCAAGGCCACTTTGGAATGGATAATAGAAACTATCAACCTTCATCCCTGTTAATGAAACATCAGTATGACATCAAAACTCCATATCACTCTTCAAGGTTTCAGCCATGTGGGACGGTGAAAAACCAGTGGACAAGATTGAGTTCAGAGTGGAGCAATATTAAGAGGATAGGGAAATCACACCTATTTGATGTGAGGGATGCAATCACAAGAAACGGATCTATTGGATGTAGAGAATTTATTGAAGAAAAGAGATGGCCTCATCGTGAAATAGTTGGAGTTGGATCACAAGTAGGTGACAGAGTAAGGATTTCTAATTGGGACGACAATTATAATAATTCTCCTCTACGGAGAGCCAAATATAGTTCTATCCATGATCAATACCAACGTAGTTCTTGTGCTCCAGTCTTTTCCTCAACTCATGCGCAATTTGATGCTAAGGTTCATGATGTAAAAGATGGAATCATGCGATGTATGAATGAGGAGATATCACGGGGAGGTGTGAAAGCCCAAATATCAGAGAGGTTGGAGGAGAAGAAAGGGTCGGCTACAACTATAAGTTCCTTAGAGTTGAGTTTAAGCCATGATCATTTTGGAAACATTAGAGAGAAGAACTTGGTCCCAGGTCCACCACAAAACGATGATCAAGTTAATACGAAGCTTTCTCTTTCGTTGTTGCGACATGAAAATTAA 1203 0.4123 MAENNIYYISDEEDDKSEEGSELEGRVYKKKRSLLDLNEEAVGDDDRSSQEEGNVSSNNNSSSTDQVMRERTTTTSVRQYVRSKMPRLRWTPDLHLAFVLAVERLGGQERATPKLVLQLMNVRGLSIAHVKSHLQMYRSKKLDESGQVMSQNRGMQGRANIVETYERYNKAQGHFGMDNRNYQPSSLLMKHQYDIKTPYHSSRFQPCGTVKNQWTRLSSEWSNIKRIGKSHLFDVRDAITRNGSIGCREFIEEKRWPHREIVGVGSQVGDRVRISNWDDNYNNSPLRRAKYSSIHDQYQRSSCAPVFSSTHAQFDAKVHDVKDGIMRCMNEEISRGGVKAQISERLEEKKGSATTISSLELSLSHDHFGNIREKNLVPGPPQNDDQVNTKLSLSLLRHEN 400
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi01g0526 400 Pfam Myb-like DNA-binding domain 88 138 IPR001005 -
Mibi01g0526 400 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 86 141 IPR006447 GO:0003677
Mibi01g0526 400 MobiDBLite consensus disorder prediction 52 77 - -
Mibi01g0526 400 FunFam Myb family transcription factor 84 142 - -
Mibi01g0526 400 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL7-LIKE 62 178 - -
Mibi01g0526 400 MobiDBLite consensus disorder prediction 38 77 - -
Mibi01g0526 400 Gene3D - 85 142 - -
Mibi01g0526 400 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 82 142 IPR017930 -
Mibi01g0526 400 MobiDBLite consensus disorder prediction 1 25 - -
Mibi01g0526 400 SUPERFAMILY Homeodomain-like 84 140 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi01g0526 Mibi-ChrMibi01 4950338 4952943 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi01g0526 74 153 G2-like Transcription Factor Family AT2G42660 71.765 8.81e-35 127
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Mibi01g0526 Myb_DNA-binding 2.7e-06 CL0123
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi01g0526 01 4950338 4952943 Mibi01g0526 01 4950338 4952943 ECH