Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi01g0523 ATGGACTCCCCCGACGGAGCCCCGTCGCCGCCCTCGACGGCGCCGGCGCGGCCTTCGCCGTTCCCCGGCCGTGAAGACTGTTGGACGGAGGAGGCCACCGTGACGCTCATCGACGCATGGGGCGAACGGTATCTGGAGCTGAACCGAGGGAACCTCCGTCAGAAGCACTGGCAAGAAGTCGCCGACGCCGTTAACGCCAATCACGGCCACGTCAAGAAGGCCCGCCGTACGGACGTCCAGTGCAAGAACCGCATCGACACACTGAAGAAGAAGTACAAGATCGAGAAGAACAAGGTCGTCGATTTCAAAGGCAACTACACTAGCCCTTGGCCCTTCTTTCCCCGCCTCGACGCTCTCATCGGCGATGCCTTCCCGATTAAGAGGCCTTCGCCGGCGCCCATCGACCGTACCCGCCGTGCCTCGCCGCAGCCCAAGTCTCCGGCGTGGGTAATGTCGCACGTGCCTGTGGGCCCCCGATCTGGCACTCAGAAACGGCCGCCGGTGCCGTCTAGTTTGAGAGATTTCTCTTTCCGCCGGAACTTCTCGGCTTTCGCGGCGGCTGCTGCGGCGGCGGCCGAGGCGGAGGATGAGGATTCCGATGATTCGAGGTCGAGTAGTGGCACTGGAAGTAGGAAGAGAGCAAGAGCAAGAGAAAGAGAAAGAGAGGGAAAGAGGGACTCGGAGTTTGGGTACAGAGAGCTGGCACAGGCGATAGAGAGGTTTGGGGAGATATATGAGAGGGTGGAGGCGGCGAAGCAGAGGCAAATGGTGGAGTTGGAGAAACAGAGGATGCAATTTGCTAAGGATTTGGAGTACCAGAGGATGGAGCTTTTCATGGAAACTCAGGTTCAGCTTCAAAAAATCAACCGCTCCAAGCGATCTTCTCAGGCTGGTGAGTCTTATCAACTCTTATGTTTATCACCGGAGCCATCAGTGCAAATGCTGCAGTGCGCCTTTTCGCTTAATTCTTCTCATTTCGTGTCACCATTGTGTTGGTTTACACCACATTAA 1011 0.5737 MDSPDGAPSPPSTAPARPSPFPGREDCWTEEATVTLIDAWGERYLELNRGNLRQKHWQEVADAVNANHGHVKKARRTDVQCKNRIDTLKKKYKIEKNKVVDFKGNYTSPWPFFPRLDALIGDAFPIKRPSPAPIDRTRRASPQPKSPAWVMSHVPVGPRSGTQKRPPVPSSLRDFSFRRNFSAFAAAAAAAAEAEDEDSDDSRSSSGTGSRKRARAREREREGKRDSEFGYRELAQAIERFGEIYERVEAAKQRQMVELEKQRMQFAKDLEYQRMELFMETQVQLQKINRSKRSSQAGESYQLLCLSPEPSVQMLQCAFSLNSSHFVSPLCWFTPH 336
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi01g0523 336 MobiDBLite consensus disorder prediction 192 226 - -
Mibi01g0523 336 Pfam Myb/SANT-like DNA-binding domain 25 119 IPR044822 -
Mibi01g0523 336 MobiDBLite consensus disorder prediction 128 172 - -
Mibi01g0523 336 Coils Coil 245 265 - -
Mibi01g0523 336 MobiDBLite consensus disorder prediction 201 226 - -
Mibi01g0523 336 MobiDBLite consensus disorder prediction 1 18 - -
Mibi01g0523 336 PANTHER TRIHELIX TRANSCRIPTION FACTOR ASIL2 8 292 IPR044823 -
Mibi01g0523 336 Gene3D - 28 94 - -
Mibi01g0523 336 MobiDBLite consensus disorder prediction 1 26 - -
Mibi01g0523 336 FunFam trihelix transcription factor ASIL2 28 94 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi01g0523 Mibi-ChrMibi01 4901578 4902588 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi01g0523 212 288 Trihelix Transcription Factor Family AT3G14180 44.156 2.64e-15 74.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Mibi01g0523 Myb_DNA-bind_4 1e-25 CL0123
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi01g0523 01 4901578 4902588 Mibi01g0523 01 4901578 4902588 ECH