Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi01g0512 ATGGAACTCACACGAAGTAACAGAATAATGGAAGCTTTTGATTGGAGTTCAGGTATTTGTGGAAATGCCACAGAGAAAAGTAGCCATGGTTTCTCAGTTAATTCTGGTGTTATAGAAAGTGGGTTTGCTTCAGCTTCTTCTCTGGTTTTGGATAACAAGATAGGTGAGCTCGTGGATGCTTCTGTGAAAAAACAAAACAAGGGCTTGCCCTCTGAGAGAAGCATCTCAGCTTTGAAGAACCATAGCGAAGCAGAACGAAGGAGAAGAGCAAGGATCAATTCTCATCTTGATACTCTTCGCACAGTGATTCCAGGTGCCAACAAGATGGACAAAGCATCATTACTTGCAGAGGTGATCAGACATTTGAAAGAGCTAAAAGGGAATGCAACAGAAGCTTGTGAAGGTTTCATGGTACCAAAGGATAGTGATGAGATAAGAGTGGAAGAAGAAGAGGGTGGCTATGATGGTTTTCCTTATTCAATAAGGGCCTCTCTGTGTTGTGAGTATAAACCTGGGTTATTGTCTGATATAAGACAAGCACTTGATGCTCTTCATATGATGATAATGAAGGCAGAAATGGCGACTTTGGGAGGGAGGATGAAGAATGTGTTTGTGATAATAAGCTGTAAAGAGCATAGTAATATTGAAGATTCAGAGTATAGGCAGTTTCTTGCTGGTTCTGTCCATCAGGCGATCAAGTCTGTGGTTGATAGATTCTCTGCTTCACAGGACCTCTTGGGAATCAGAAAGAGGAGGAGGATTTCTGTGTTCAATTCATCATCTCTAGGAGAATTCTGGTGA 801 0.4157 MELTRSNRIMEAFDWSSGICGNATEKSSHGFSVNSGVIESGFASASSLVLDNKIGELVDASVKKQNKGLPSERSISALKNHSEAERRRRARINSHLDTLRTVIPGANKMDKASLLAEVIRHLKELKGNATEACEGFMVPKDSDEIRVEEEEGGYDGFPYSIRASLCCEYKPGLLSDIRQALDALHMMIMKAEMATLGGRMKNVFVIISCKEHSNIEDSEYRQFLAGSVHQAIKSVVDRFSASQDLLGIRKRRRISVFNSSSLGEFW 266
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi01g0512 266 Gene3D - 72 133 IPR036638 GO:0046983
Mibi01g0512 266 SMART finulus 82 131 IPR011598 GO:0046983
Mibi01g0512 266 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 69 128 IPR036638 GO:0046983
Mibi01g0512 266 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 76 125 IPR011598 GO:0046983
Mibi01g0512 266 PANTHER TRANSCRIPTION FACTOR BHLH30 43 259 IPR045847 GO:0003700|GO:0006355
Mibi01g0512 266 CDD ACT_UUR-ACR-like 164 206 - -
Mibi01g0512 266 Pfam Helix-loop-helix DNA-binding domain 80 125 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi01g0512 Mibi-ChrMibi01 4809134 4810046 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi01g0512 73 264 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G68810 42.857 1.84e-35 128
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Mibi01g0512 HLH 7.5e-12 No_clan