Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi01g0478 ATGCTCGCGGTGTCACCTTTGAGAAGCACAAGGGATGAAGAAGGACAAGGAGAGATGGAGAGATTTTCGATGGAGTCGCATGAATTTGGTGACCTCTCAGATGGGAACTTATTGGAAAGCATCAACTTCGACGATATATTTGTGGGAATCAACGACGGAGATGTATTACCGGATCTGGAGATGGACCCCGAGATATTCGCAGACTTCTCCCTCAGCGCCGGTGACGACTCCGACATGGCCACGTCATCGGTCTCGTTGGAAAACACAGAGACTAAATATATAGTTGACCACAATATAACGGGGACGACGAAAGAAGAGGAAGATAAGGTGTCATCGGATTCAGGTTTGGGTTCAGGTTCGAATTCGGGAGAGGAGATAGTGAGCAAGAGGGATGAATCGGTGGGGGTGAAGGCGTCTCGTCAGAAGGAAGGTGACAAGGGAACAAGGAAATCATCATCAGCCGAGTCAAAGAATTCTCAAGGGAAGAGAAAAGTGAAGGTGGACTGGACACCGGAATTGCACAGGAGGTTCGTGCAGGCAGTGGAGCAATTAGGAGTGGATAAGGCGGTGCCATCAAGAATATTGGAAATTATGGGCATTGATTGTCTCACTCGCCACAACATAGCCAGCCACCTTCAAAAATACAGATCGCACAGGAAACATCTGCTGGCACGTGAAGCGGAAGCGGCAAACTGGAGTAAGAGGAGGCAATGTTATGGAGGGAAGAGAGAGGGAGGAGGTAGCCCGTGGCTGGCGGTGGCGCCGCCCACGATAGGGTTCCCTCCGGTGACCACTCAGGCGGCGGCGGCAATGCAGCAGTTCAGGGCGTTACACGTGTGGGGGCATCCAAGGATGATGGAGGCATCCTTCATGCCATTGTGGCCTAATAATAAGCATCCTCTCACTTGGCCTCCCCCCACTCCTGATCCTTCTTCCTTTTGGCACCACCACCCCGCTTCCAATGCACTAACGCCAGGAACGCCTTGCTTTGCACAGCCTCTCACTGCAACGAGATTTGCGTCATCGACTGTGCCGGGTATCCCGCCCCATGCCATGTACAAAGTAGATCCTTCCATCGCCCTCCCCACGGCACAACCCAATCCTCGCCCACTCATTGATTCCCATCCTTCAAAGGAGAGTGTAGATGCAGCTATTGGGGATGTTTTATCAAAGCCATGGCTGCCACTTCCTCTTGGGCTTAAAGCTCCTGCGCTTGACAGTGTGATGGGTGAATTGCAGAGACAAGGAATTCCAAGAATTCCACCCTCTTGTGCTTGA 1278 0.5196 MLAVSPLRSTRDEEGQGEMERFSMESHEFGDLSDGNLLESINFDDIFVGINDGDVLPDLEMDPEIFADFSLSAGDDSDMATSSVSLENTETKYIVDHNITGTTKEEEDKVSSDSGLGSGSNSGEEIVSKRDESVGVKASRQKEGDKGTRKSSSAESKNSQGKRKVKVDWTPELHRRFVQAVEQLGVDKAVPSRILEIMGIDCLTRHNIASHLQKYRSHRKHLLAREAEAANWSKRRQCYGGKREGGGSPWLAVAPPTIGFPPVTTQAAAAMQQFRALHVWGHPRMMEASFMPLWPNNKHPLTWPPPTPDPSSFWHHHPASNALTPGTPCFAQPLTATRFASSTVPGIPPHAMYKVDPSIALPTAQPNPRPLIDSHPSKESVDAAIGDVLSKPWLPLPLGLKAPALDSVMGELQRQGIPRIPPSCA 425
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi01g0478 425 MobiDBLite consensus disorder prediction 11 27 - -
Mibi01g0478 425 Gene3D - 161 222 - -
Mibi01g0478 425 PANTHER TRANSCRIPTION ACTIVATOR GLK1 1 424 IPR044825 GO:0003700|GO:0045893
Mibi01g0478 425 MobiDBLite consensus disorder prediction 125 167 - -
Mibi01g0478 425 MobiDBLite consensus disorder prediction 97 167 - -
Mibi01g0478 425 MobiDBLite consensus disorder prediction 1 27 - -
Mibi01g0478 425 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 161 220 IPR017930 -
Mibi01g0478 425 FunFam Two-component response regulator 160 223 - -
Mibi01g0478 425 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 164 218 IPR006447 GO:0003677
Mibi01g0478 425 SUPERFAMILY Homeodomain-like 162 221 IPR009057 -
Mibi01g0478 425 Pfam Myb-like DNA-binding domain 167 216 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi01g0478 Mibi-ChrMibi01 4533977 4537352 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi01g0478 1 298 G2-like Transcription Factor Family AT5G44190 41.234 1.14e-56 189
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Mibi01g0478 Myb_DNA-binding 5.4e-08 CL0123
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi01g0478 01 4533977 4537352 Mibi01g0478 01 4533977 4537352 ECH