Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi01g0470 ATGGATGAGATGAAACAGAAGAAAGTGGTGAAGGGGGAGGCCATGGGGGAATACGAGGAGAAGAAAAATGGATTATTCTTGGTGGGGGAAGAATATGAGCAGAGGAAGAGAGTGATGTCGGCGAAGAAAGGGAGTGGTTTGAGGTGTTGCCAGGCGGAGAACTGCACGGCGGAGCTGAGTGATGCGAAGGCGTATCATAGGAGGCACAAGGTGTGCGAATATCATGCCAAGGCTCAGCAAGTTGTCGTTTCTGGCATCCTACAACGTTTTTGTCAGCAATGCAGCAGATTCCATGAGTTAGGTGAGTTTGATGAGACGAAGAGGAGCTGCAGGAGGCGTCTCGCTGGGCACAACGAACGAAGAAGGAAGAGCTCAGTGAGTGAGACTCAGTCAGAAGGGTCAAGCCAGAAAAGAACAGGAACCACTCATCAGCTGAAGGGAAGGGTTTGTGGTGGTGCTGGTAGTGATGAAAGAGGCAGGATTCAGATCACTATATAA 498 0.5 MDEMKQKKVVKGEAMGEYEEKKNGLFLVGEEYEQRKRVMSAKKGSGLRCCQAENCTAELSDAKAYHRRHKVCEYHAKAQQVVVSGILQRFCQQCSRFHELGEFDETKRSCRRRLAGHNERRRKSSVSETQSEGSSQKRTGTTHQLKGRVCGGAGSDERGRIQITI 165
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi01g0470 165 ProSiteProfiles Zinc finger SBP-type profile. 47 124 IPR004333 GO:0003677
Mibi01g0470 165 FunFam Squamosa promoter-binding-like protein 14 41 111 - -
Mibi01g0470 165 MobiDBLite consensus disorder prediction 114 155 - -
Mibi01g0470 165 PANTHER SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 4 35 140 IPR044817 GO:0003677
Mibi01g0470 165 SUPERFAMILY SBT domain 48 128 IPR036893 GO:0003677|GO:0005634
Mibi01g0470 165 MobiDBLite consensus disorder prediction 128 143 - -
Mibi01g0470 165 Pfam SBP domain 50 123 IPR004333 GO:0003677
Mibi01g0470 165 Gene3D - 40 111 IPR036893 GO:0003677|GO:0005634
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi01g0470 Mibi-ChrMibi01 4480593 4481574 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi01g0470 40 137 SBP-box Gene Family AT1G53160 67.347 8.18e-43 138
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF SBP Mibi01g0470 SBP 4.2e-32 No_clan