Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi01g0467 ATGTTATGCTTAGGATTTGATATGGTTGCCCTTGAAAATTTGAACTTTTGGTTGGTTAAGAGGAAAGGACTAGGGTTTTTATTCCAGATTGTGTACCTTTGGTGGGTTGTTCTACTGTTCCTTCGACCTGTGGCGGGTCTGAGACCGTTAAGAGAAAGAACTCGGTCATGGAGCGATGAGTGGCTGTTTTCAACTAAAGATGAAAGTGATCAATTTTCACAATGGAACATAACAGGAACTTACAAAGGGACATGGAAATTTTTAGATACTGCAAATGGATCTTCAAGATTTTCAGACATCAGAAATACAAAAGGCAACTCTGTAATTGAATTATTTAGTTCGCCCACAAAAATAACTGGTGTGCATTATGTTCAGGGGGTGGTTATATTCCATGATGTGTTTGACAATGAGTACAATGTTGGTGGTGCTCAAATCAGAGTGGAAGGAGTGTATATATGGCCTTTTAAACAGCTTCGAATGGTATCTAACAGTGGAAAAGAGGGATTTTCATATCAGGATGAAGATTATATCTTATCTAATCCATATCATCTGCTTGGATTGTTCTCATCTCAGGTATTCCAAGAATCCTCACGAGATAAGACACGGAGAAGAAAACATTCTCCTATATATGACATGGAGAAACACTGTAATATGGAAATTTCAGCACAGTTTTCACGATCATCATCAAAGAATGATGGGGGTCATGATCGATTCCGTCTAGAAGGGATGATGGAGAGTCCCTCAGTGGATGATGATGGGGAATGCTTTTCACCGTTATCGTTAAATGCAACTTCTGTTAACATTGAGGTCTACTATAACAAAGCAGTGAACTACACCTTGATGGTTACCTTTATCTCTTTCTTGCAAGTTCTTCTATTGATTCGGCAAATGGAACATAGCAACACTCAATCTGGGGCTGCTAAGGTTTCAAAAATAATGATTGGCCAACAGGCTATAATGGATGCATATCTTTGCCTTTTACATCTGACCGCAGGAATACTGGTTGAGTCCTTGTTTAATGCTTTTGCAACTGCTGCTTTTTTTAAGTTTGTGGTCTTCTCAATATTTGAGATGAGATATCTCCTTGCGATATGGAAGGCAAATAGGCCTTTGAGTAATGGGGAAGGCTGGGAGACAATGAGGCGTGAGCTTTCATCTTTATACGTTCGTTTCTATGGAATCCTGGTGGGAGGAATTCTGTTCATGTACCAGTTCCATAATTATTTGAGACCGATACTTCTTCTCATGTACTCATTTTGGATACCTCAGATAGTTACCAATGTTATTCGTGATTCCCGCAAACCATTGCATCCTCATTATATCTTAGGGATAACCGTCACTCGCCTGGCAGTGCCATTATATATATTTGGTTGCCCAAAAAACTTCATGCGAATCGAGCCAGACAAGAGCTGGTGTTTGTGTTTGGTTGTATTTATTGGACTTCAGGCCGCAATTCTTCTACTTCAGAACTATCTTGGGTCCCGCTGGTTCATTCCTCGTCAGATTCTGCCCGAGAAATACAGCTATTATAGGAGGTTTGGTCAAAGTACAAATCATGGTACAGATTGTGTTATTTGCATGACGGCTATTGATCTTTCTCAGCGATCAAATGACTGCATGGTGACACCTTGTGAGCATTTCTTCCACTCTGGTTGTTTGCAAAGATGGATGGATATAAAGATGGAGTGCCCGACATGCCGGCGCCCTCTGCCGCCTGCTTAG 1722 0.4065 MLCLGFDMVALENLNFWLVKRKGLGFLFQIVYLWWVVLLFLRPVAGLRPLRERTRSWSDEWLFSTKDESDQFSQWNITGTYKGTWKFLDTANGSSRFSDIRNTKGNSVIELFSSPTKITGVHYVQGVVIFHDVFDNEYNVGGAQIRVEGVYIWPFKQLRMVSNSGKEGFSYQDEDYILSNPYHLLGLFSSQVFQESSRDKTRRRKHSPIYDMEKHCNMEISAQFSRSSSKNDGGHDRFRLEGMMESPSVDDDGECFSPLSLNATSVNIEVYYNKAVNYTLMVTFISFLQVLLLIRQMEHSNTQSGAAKVSKIMIGQQAIMDAYLCLLHLTAGILVESLFNAFATAAFFKFVVFSIFEMRYLLAIWKANRPLSNGEGWETMRRELSSLYVRFYGILVGGILFMYQFHNYLRPILLLMYSFWIPQIVTNVIRDSRKPLHPHYILGITVTRLAVPLYIFGCPKNFMRIEPDKSWCLCLVVFIGLQAAILLLQNYLGSRWFIPRQILPEKYSYYRRFGQSTNHGTDCVICMTAIDLSQRSNDCMVTPCEHFFHSGCLQRWMDIKMECPTCRRPLPPA 573
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi01g0467 573 ProSiteProfiles Zinc finger RING-type profile. 523 567 IPR001841 -
Mibi01g0467 573 FunFam E3 ubiquitin-protein ligase, putative 509 573 - -
Mibi01g0467 573 PANTHER RING ZINC FINGER PROTEIN 122 572 - -
Mibi01g0467 573 SUPERFAMILY RING/U-box 509 572 - -
Mibi01g0467 573 SMART ring_2 523 566 IPR001841 -
Mibi01g0467 573 Pfam Ring finger domain 522 567 IPR001841 -
Mibi01g0467 573 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 511 573 IPR013083 -
Mibi01g0467 573 SMART ringv_2 522 567 IPR011016 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi01g0467 Mibi-ChrMibi01 4460700 4468462 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi01g0467 518 573 C3H Transcription Factor Family AT2G35420 39.286 1.40e-08 54.3
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi01g0467 01 4460700 4468462 Mibi01g0467 01 4460700 4468462 ECH