Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi01g0460 ATGGATCATCATCATCAGCAGCAGCCACGGATTCAAGATCCTTTGCACACCAAGCTCGAAAGAAGGCTCATAGAGAAAAACCGAAGAACCCAGATGAAGATCCTCTACTCCAAACTCAACTCTCTTCTCCCAAATTTCAACCCTAAGCAAATGATTCCGCTACCTGATCAGATAGACGAGGCCATAAACTATATAAAGAGTTTAGAGGCAAAGGTGAAGATGGCTCAGGAGAAGAAAGAGAGATTAATGATGATGGGGAAGAAAAGGTCACATGCTTGCTGCAGCTCTATTAGCAGTCCATCTGATGACACGAAGACAAAGAGAAGCCTTTATTCACCACAAATTCAGATTCATGAAATGGGTTCGTCGCTAGAAGTAGTTCTGATCAATGGTTTGGATAATCAGTTCATTTTCTATGAGATTATTTGCATACTGCACCAAGAGAACTTGGAGGTCATAAGTACCAATTCCTCACTCGTCGGAGATTCATTGATGCTAAACGTTGTGCACGCACAGATTCAGCCGTCTTTGCATGAATTCGGGGCCACCAAAGTAAGTGACAGATTGAAAAGGTTTGTGTATGGATCCGCCAGTGATGTAGAAACACAGCCATCAGCCGAGTTGCAAGATTATTTCCTAATTGGTACGGAGGATACATGGGGCTTCTAA 669 0.429 MDHHHQQQPRIQDPLHTKLERRLIEKNRRTQMKILYSKLNSLLPNFNPKQMIPLPDQIDEAINYIKSLEAKVKMAQEKKERLMMMGKKRSHACCSSISSPSDDTKTKRSLYSPQIQIHEMGSSLEVVLINGLDNQFIFYEIICILHQENLEVISTNSSLVGDSLMLNVVHAQIQPSLHEFGATKVSDRLKRFVYGSASDVETQPSAELQDYFLIGTEDTWGF 222
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi01g0460 222 Pfam Helix-loop-helix DNA-binding domain 20 69 IPR011598 GO:0046983
Mibi01g0460 222 SMART finulus 22 74 IPR011598 GO:0046983
Mibi01g0460 222 FunFam Transcription factor bHLH162 10 95 - -
Mibi01g0460 222 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 18 84 IPR036638 GO:0046983
Mibi01g0460 222 Gene3D - 11 97 IPR036638 GO:0046983
Mibi01g0460 222 PANTHER ACHAETE-SCUTE TRANSCRIPTION FACTOR-RELATED 17 194 IPR015660 -
Mibi01g0460 222 Coils Coil 58 85 - -
Mibi01g0460 222 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 16 68 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi01g0460 Mibi-ChrMibi01 4391698 4392578 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi01g0460 19 193 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G20970 37.079 1.52e-26 99.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Mibi01g0460 HLH 2.3e-05 No_clan