Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi01g0454 ATGGGTTGCATAAGCTCCAAGACTTCAGCTGTGGAAGACAGCCGAGAAGGTTTGACGACGAAATTGTCATCATTGAGTAAAAGGTCATCGGAGCTGAATGTTTCACGATTGAATTCATCAAAAAGGGATGAGGGAGTTTGGACCAAAAATGTGTTGGATGCCAGGGATGTAAAAGTCTCGTTAATTAACAAGAAACCCGACGGTCCAGTGAAGTTTTATGATGATCAAATTGGGGGGGAGAAAGTTGAGAAACCCGACTTTACTGTTCTTAATCATCCTGATATTGGTAAAGTACCGAAGGCTACAGAAGGAGAACAAGTTGCGGCAGGGTGGCCAGCTTGGCTATCTTCTGTTGCTGGTGAAGCTATCAAGGGATGGATACCTCGGAGTGCTAATACTTTCGAGAGGTTATATAAAATTGGCCAAGGAACTTACAGTTCTGTTTATAAGGCACGTGATGTGACTCATCAAAAGACAGTTGCTTTGAAGAAAGTACGCTTTGATAATCTTGATCCTGAGAGTGTCAAGTTTATGGCAAGAGAAATTTTTGTTCTGCGTTGGCTTGACCATCCTAACGTGATAAAGTTAGAGGGCTTGATAACATCCCAGACATCTCGCAGCCTGTATCTTGTTTTTGAATATATGGAACATGATCTAACCGGACTCTTATCATGTCCTGACATTAAACTTTCAGAACCACAGATTAAGTGCTACATGCAGCAGCTTCTCAGCGGACTGGATCATTGTCATAGTCGTGGTGTCCTCCACCGGGACATTAAGGGGTCAAATCTTCTCATAGACAATAATGGCATCTTAAAGATTGCAGATTTTGGTTTAGCAAGCTTTTTTGACCCCCATCACAGTGTTCCATTGACCAGCCGAGTGGTGACTCTTTGGTATAGGCCTCCAGAACTATTACTTGGAGCATCTCATTATGGTGTTGCAGTGGATTTGTGGAGCACTGGTTGTATACTGGGGGAACTATATTCTGGCAGGCCCATATTGCCAGGAAAAACAGAGGTTGAGCAATTGCATAGGATTTTTAAGCTTTGTGGCTCACCATCTGAAGATTACTGGCTTAAATTGCGGTCGCCACATTCAACAGTATTTAAGCCTTCACACCATTATAGACGTTGTGTTGCCGAAACATTCCAGGAATATCCACCTGCTGCTGTGAGGCTAATCGAGACCCTACTTTCCATAGATCCTGCACATCGAGGAACAGCAGCTAATGCCTTAAAAAGTGAGTTCTTTACCATGGAACCCCTTGCTTGTGACCCTTCAAGTTTACCAAAATATCCTCCCAGCAAAGAGATTGACGCTAAGTTGCGAGAAGAAGCAATTAGAAGGCAAAGAGCTGTTGGAGGAAGGGAGCAGAAAGTTGGCATGGGAGTTAGACCAGAACAAGGACTTCAGGCGCTTGCGGCAAATAAAAATGCTGACCCGTGCTCGTTAATGCAGCAAGGACGTCATTCCAACTCAAAGAGTCGAAATGAATTGTTCAATCCTCCCAGAGAATCTGCTTCGGGGTTGTTAGTTTTTCCACGTAAACAGTCTGACAATGTTAAGGGAATGGAAAATAATTTATCTGGTCATCTGTACAAGAGGCCTTCACATTCAGGTCCATTGGTTCAGGGTCCTGGCTGGGTAAAGGTTGGGAAGGACATGGATGAGCAGCATCTTGGTTCCAACAGAGTCAACCTGTCAAAACTATCTGGTTTAGTTGCATCCAGGACTTCAATGTCTGAAGATCAGGAGGAAAAATCACATTCCTCACACCCCAGAAGAACAGTTGATGTACGAAAATCTGTGGAGTCAGCTAGTGGATCAGAGTTAAGAAGGCAGGCCCAAAAACACCAGTCTCAGCGAATTGATCTGCGTCGTGTAGAACATGGAAGGACCCCCCCTAAAGAATCAACTCCGGAAGGGTATGGCAGGGGAAACAAGATCTATCTTTCTGGTCCATTAATGGTATCTTCAAACAACATGGATCAGATGATCAAAGAACATGATCGAAAGATTCAGGAATATTCAAGACGAGCTAGAATTGACAAGTCAAGAGGTGAAAAAGTTCGAGCCAAGTATAAGTAG 2091 0.4371 MGCISSKTSAVEDSREGLTTKLSSLSKRSSELNVSRLNSSKRDEGVWTKNVLDARDVKVSLINKKPDGPVKFYDDQIGGEKVEKPDFTVLNHPDIGKVPKATEGEQVAAGWPAWLSSVAGEAIKGWIPRSANTFERLYKIGQGTYSSVYKARDVTHQKTVALKKVRFDNLDPESVKFMAREIFVLRWLDHPNVIKLEGLITSQTSRSLYLVFEYMEHDLTGLLSCPDIKLSEPQIKCYMQQLLSGLDHCHSRGVLHRDIKGSNLLIDNNGILKIADFGLASFFDPHHSVPLTSRVVTLWYRPPELLLGASHYGVAVDLWSTGCILGELYSGRPILPGKTEVEQLHRIFKLCGSPSEDYWLKLRSPHSTVFKPSHHYRRCVAETFQEYPPAAVRLIETLLSIDPAHRGTAANALKSEFFTMEPLACDPSSLPKYPPSKEIDAKLREEAIRRQRAVGGREQKVGMGVRPEQGLQALAANKNADPCSLMQQGRHSNSKSRNELFNPPRESASGLLVFPRKQSDNVKGMENNLSGHLYKRPSHSGPLVQGPGWVKVGKDMDEQHLGSNRVNLSKLSGLVASRTSMSEDQEEKSHSSHPRRTVDVRKSVESASGSELRRQAQKHQSQRIDLRRVEHGRTPPKESTPEGYGRGNKIYLSGPLMVSSNNMDQMIKEHDRKIQEYSRRARIDKSRGEKVRAKYK 696
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi01g0454 696 Gene3D Transferase(Phosphotransferase) domain 1 217 456 - -
Mibi01g0454 696 ProSitePatterns Serine/Threonine protein kinases active-site signature. 254 266 IPR008271 GO:0004672|GO:0006468
Mibi01g0454 696 MobiDBLite consensus disorder prediction 616 637 - -
Mibi01g0454 696 SMART serkin_6 134 418 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi01g0454 696 FunFam probable serine/threonine-protein kinase At1g54610 121 216 - -
Mibi01g0454 696 Pfam Protein kinase domain 135 418 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi01g0454 696 SUPERFAMILY Protein kinase-like (PK-like) 128 421 IPR011009 -
Mibi01g0454 696 PANTHER CELL DIVISION PROTEIN KINASE 132 423 - -
Mibi01g0454 696 ProSiteProfiles Protein kinase domain profile. 134 418 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi01g0454 696 MobiDBLite consensus disorder prediction 485 550 - -
Mibi01g0454 696 CDD STKc_CDK9_like 134 418 - -
Mibi01g0454 696 Coils Coil 660 680 - -
Mibi01g0454 696 MobiDBLite consensus disorder prediction 581 608 - -
Mibi01g0454 696 FunFam probable serine/threonine-protein kinase At1g54610 217 458 - -
Mibi01g0454 696 Gene3D Phosphorylase Kinase; domain 1 121 216 - -
Mibi01g0454 696 MobiDBLite consensus disorder prediction 577 651 - -
Mibi01g0454 696 MobiDBLite consensus disorder prediction 1 22 - -
Mibi01g0454 696 MobiDBLite consensus disorder prediction 485 503 - -
Mibi01g0454 696 ProSitePatterns Protein kinases ATP-binding region signature. 140 163 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi01g0454 Mibi-ChrMibi01 4311590 4316318 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi01g0454 126 452 Core Cell Cycle Gene Families AT5G10270 49.429 1.71e-107 334
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-CRK7-CDK9 Mibi01g0454 Pkinase 3.7e-66 CL0016