Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi01g0444 ATGGCCTTAGATTTGCACTATGAGGATTCTGCAGCACAAGCTGATGCTCCCTCTGGAGATAAATCTTGTTCGGGAAAGTGGCATTCTGCCCCTGAAGCCATTGCAGATTGTGATAGGGATGCTTCTGGTGAATTTGAATGCAATATCTGCCTAGATCCCTTGCATGATCCAGTATCAACACTTTGTGGCCATCTCTACTGCTGGCCCTGCATTTACAAATGGATCCATCTTAGGAATGTTTCTTCTCAAAACACAGATCAAGAGAGGACATTCTGCCCTGTATGCAAATCAGAAATCTCTCAATCCTCCCTCATTCCGGTATATGGACGTATCCAAATTACAACACCTTCCAAAGATGAGTCTCACAATGTAGGGACTGCCGTACCTCCACGACCTCGCGGTCCCGTGTCAGTTCATGACATGCAAAGATCAACGCGAAGATCATATAATACCACAACAGCTTCCCAACCATTTACTCAATTTCACCAACCCCATTATCCTTATCAGGCTCAACAGTTCAACGCCCTGGACACAACACATGGAGTGTTTGGTCAGATGATATATGCAAGGGTCTTTGGTAACCAGTTGACAAACATGTACACTTCTAATTCATACTGTCTCGTGGGGAACAACAATCCGAGGATGAGAAGGCATTTGATGCAAGCGGATAAATCACTCCGCAGAATCTGTTTCTTCTTCTTCTGCTGCACAGTTTTGTGTCTTCTCTTATTCTGA 735 0.4449 MALDLHYEDSAAQADAPSGDKSCSGKWHSAPEAIADCDRDASGEFECNICLDPLHDPVSTLCGHLYCWPCIYKWIHLRNVSSQNTDQERTFCPVCKSEISQSSLIPVYGRIQITTPSKDESHNVGTAVPPRPRGPVSVHDMQRSTRRSYNTTTASQPFTQFHQPHYPYQAQQFNALDTTHGVFGQMIYARVFGNQLTNMYTSNSYCLVGNNNPRMRRHLMQADKSLRRICFFFFCCTVLCLLLF 244
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi01g0444 244 PANTHER E3 UBIQUITIN-PROTEIN LIGASE RNF5-RELATED 6 241 IPR045103 GO:0005783|GO:0006511|GO:0061630
Mibi01g0444 244 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 22 127 IPR013083 -
Mibi01g0444 244 SUPERFAMILY RING/U-box 41 109 - -
Mibi01g0444 244 SMART ring_2 47 95 IPR001841 -
Mibi01g0444 244 MobiDBLite consensus disorder prediction 1 23 - -
Mibi01g0444 244 MobiDBLite consensus disorder prediction 117 143 - -
Mibi01g0444 244 CDD RING-HC_AtRMA_like 45 97 - -
Mibi01g0444 244 ProSitePatterns Zinc finger RING-type signature. 62 71 IPR017907 -
Mibi01g0444 244 ProSiteProfiles Zinc finger RING-type profile. 47 96 IPR001841 -
Mibi01g0444 244 Pfam Zinc finger, C3HC4 type (RING finger) 47 95 IPR018957 GO:0046872
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi01g0444 Mibi-ChrMibi01 4256242 4256976 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi01g0444 40 244 C3H Transcription Factor Family AT4G28270 39.524 1.82e-45 149
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi01g0444 01 4256242 4256976 Mibi01g0444 01 4256242 4256976 ECH