Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi01g0440 ATGCTCTCTGCCGCCACCAAACTGTCGGCGACGCCCAACCTTTTTCCCGCCATCTGCGCTCGCCGGAGCTCAGTTTTTCACCTTCTCAAGGCGGCGACTTCCCTTCACTACACAATGCACCACCGCCGCAGCTCCGCCGTACAGTTTTTGCGCCTCTTCATTCTCTTGGCGTTGAAAGCTTCCATGGCATTCTCGCAGGAACAGCTTCATCACCACCGTATCCCTCTCCCTGACCTACATTGGACCCCCGGCACCGCCACGTGGTACGGCGACCCCGAAGGCGACGGCAGTACCGGAGGGGCATGTGGGTATGGGTCGTTGGTGGATGTGAGGCCATTGAGGGCAAGGGTAGGGGCGGTGGGGCCCATACTGTTCAAGAATGGAGAAGGGTGTGGAGCTTGCTATAAAGTGAAGTGCTTGGACGACAGCATTTGCTCACGGCGAGCTGTGACGGTGATAATAACGGACGAGTGTCCGGGATGTCCTACCGACCAAACCCATTTCGACCTCAGTGGTGCCGCCTTTGGCCGTATGGCTATTGCCGGCGAACATGGTCAACTCAGGGACAGAGGTCAAATCCCAGTCATTTACCGACGAACACCGTGTAAATATCGAGGCAAAAACATTGCCTTCCAAGTGAATGAAGGTTCTACGCCTTTCTGGCTTTCACTTTTGGTGGAATTTGAGGATGGAGAAGGAGATATTGCCTCTATGCATATTCAAGAAGCAGGGTCTGTAGAGTGGCTAGAGATGAATCACCTGTGGGGTGCAAATTGGTGCATTATTGGTGGGCCTTTGAGGGGTCCATTTTCTGTGAAACTAAGCACATCCACCGGAAGATCTCTGTCTGCCAGCGATGTTATTCCAAGCAGCTGGTCTCCAAAAGCTACTTACACATCTCGTCTCAATTTCTACCCTTAA 921 0.5331 MLSAATKLSATPNLFPAICARRSSVFHLLKAATSLHYTMHHRRSSAVQFLRLFILLALKASMAFSQEQLHHHRIPLPDLHWTPGTATWYGDPEGDGSTGGACGYGSLVDVRPLRARVGAVGPILFKNGEGCGACYKVKCLDDSICSRRAVTVIITDECPGCPTDQTHFDLSGAAFGRMAIAGEHGQLRDRGQIPVIYRRTPCKYRGKNIAFQVNEGSTPFWLSLLVEFEDGEGDIASMHIQEAGSVEWLEMNHLWGANWCIIGGPLRGPFSVKLSTSTGRSLSASDVIPSSWSPKATYTSRLNFYP 306
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi01g0440 306 Gene3D - 76 202 IPR036908 -
Mibi01g0440 306 ProSiteProfiles Expansin, family-45 endoglucanase-like domain profile. 99 207 IPR007112 -
Mibi01g0440 306 SUPERFAMILY Barwin-like endoglucanases 80 206 IPR036908 -
Mibi01g0440 306 SUPERFAMILY PHL pollen allergen 207 300 IPR036749 -
Mibi01g0440 306 FunFam Expansin B3 65 203 - -
Mibi01g0440 306 PRINTS Expansin/Lol pI family signature 121 139 IPR007118 GO:0005576
Mibi01g0440 306 PRINTS Expansin/Lol pI family signature 98 116 IPR007118 GO:0005576
Mibi01g0440 306 PRINTS Expansin/Lol pI family signature 248 262 IPR007118 GO:0005576
Mibi01g0440 306 PRINTS Expansin/Lol pI family signature 80 95 IPR007118 GO:0005576
Mibi01g0440 306 PRINTS Expansin/Lol pI family signature 286 300 IPR007118 GO:0005576
Mibi01g0440 306 PRINTS Expansin/Lol pI family signature 190 206 IPR007118 GO:0005576
Mibi01g0440 306 PANTHER EXPANSIN-B3 58 304 - -
Mibi01g0440 306 PRINTS Major pollen allergen Lol pI signature 211 226 IPR005795 GO:0005576|GO:0019953
Mibi01g0440 306 PRINTS Major pollen allergen Lol pI signature 119 130 IPR005795 GO:0005576|GO:0019953
Mibi01g0440 306 PRINTS Major pollen allergen Lol pI signature 157 172 IPR005795 GO:0005576|GO:0019953
Mibi01g0440 306 PRINTS Major pollen allergen Lol pI signature 227 242 IPR005795 GO:0005576|GO:0019953
Mibi01g0440 306 PRINTS Major pollen allergen Lol pI signature 276 293 IPR005795 GO:0005576|GO:0019953
Mibi01g0440 306 PRINTS Major pollen allergen Lol pI signature 179 194 IPR005795 GO:0005576|GO:0019953
Mibi01g0440 306 ProSiteProfiles Expansin, Cellulose-binding-like domain profile. 220 300 IPR007117 -
Mibi01g0440 306 FunFam Beta-expansin 3 204 305 - -
Mibi01g0440 306 Gene3D - 203 301 IPR036749 -
Mibi01g0440 306 Pfam Expansin C-terminal domain 209 289 IPR007117 -
Mibi01g0440 306 SMART dpbb_1 117 197 IPR007112 -
Mibi01g0440 306 Pfam Lytic transglycolase 121 196 IPR009009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi01g0440 Mibi-ChrMibi01 4237059 4239548 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi01g0440 53 261 Expansin Gene Family AT4G28250 66.507 5.04e-94 275
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi01g0440 01 4237059 4239548 Mibi01g0440 01 4237059 4239548 ECH