Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi01g0435 ATGGCCAACGCCAGTAAAAGTGGCAAATCCCCCGAGGGCGGTGGAGAAATCCGAGATTGGGAGATTGAAAGGGGTAAAGATGTCGACTTGAGCGGCGAGAGGAGACAATGGAAGCCAGTTTTTGAAGATGCTTCCGTCTCTAACAGGCCTCTCAAGAAAATCCGAAGCCCCCAACGTCAACAAAATCAATCCTCTGTTCCCATCCTACCTCATCCCCCTTCTTCTTCTTCCTCTTCCAGAATCGTCTTCCCTTTCGCCTTCGACGGTTCTCAACAACCTATCCATTTTCCCCACCAACAATTTACCTCCCCAGGTTCCCCTGCTTTCCGCCCACCATTTCACGCGACGCAAAATCAGCAGCAAATGTTGTCTTTTGGGTCTCAACAGCCAAACATGGTATACCCACAATACTTAGCACAAGACTCTGGAGTTCCACCCCATCAACAGCAACACCTTCTTCAGTATTGGAGAGACGCATTGAATCTGAGCCCAAGAGGAAGGATGATGATGATGATGATGAACAGTGTGGGGGCGGATGGTAGGCCAATGTACAGGCCCCCTCCTCAGCCTATAAACACTACGAAGCTGTACAGAGGAGTGAGGCAACGTCATTGGGGGAAATGGGTGGCAGAGATTCGTCTTCCTCGAAACAGGACTCGCCTCTGGCTTGGAACATTCGACACAGCTGAAGATGCTGCCTTGGCTTATGATCGCGAGGCCTTTAAACTCAGAGGAGAGAATGCTAGGCTCAATTTCCCCGAACTCTTCCTCAATAAGGACAAGCCTGCTTCCTCGACAGCCCCTGATTCTTCTCCTTCTTCTCCTTCCACTCCTCGTCAAGGTTCAACTTCTAAGCAAACTGACTCCGCTCCTGAAGGTTTCCCTACTGAATCTCCGCTTCCGCCGGAGGAGCCTCCGCCGCCGCCGGCGGAAGAGAGCACCGACAATGACTCTGGGATTGGGTCGAGTGATCTTACAATGAGCGATGAAGTACAGGTGGCATCTAATACTGGAACAGGGGAGGGTACTTCTTCGGTGTCGCAGGAACTTGTTTGGGGTGAAATGGCGGCTTGGTTTAATGCAATTCCGGCGGGTTGGGGTCCGGGAAGCCCTGTTTGGGATGATTTGGATACTTTTCAATCTCAACTTCCTTTTTTCAATCCCAATCAACAGGAATTTCATGATGCAGATCCTCATAGACAGCAAGGAGATAACAGAGGACCATCTGATTCTTCCACTTCTTCCTCTTCTTGTCCCATGAGACCCTTCTTCTGA 1275 0.5043 MANASKSGKSPEGGGEIRDWEIERGKDVDLSGERRQWKPVFEDASVSNRPLKKIRSPQRQQNQSSVPILPHPPSSSSSSRIVFPFAFDGSQQPIHFPHQQFTSPGSPAFRPPFHATQNQQQMLSFGSQQPNMVYPQYLAQDSGVPPHQQQHLLQYWRDALNLSPRGRMMMMMMNSVGADGRPMYRPPPQPINTTKLYRGVRQRHWGKWVAEIRLPRNRTRLWLGTFDTAEDAALAYDREAFKLRGENARLNFPELFLNKDKPASSTAPDSSPSSPSTPRQGSTSKQTDSAPEGFPTESPLPPEEPPPPPAEESTDNDSGIGSSDLTMSDEVQVASNTGTGEGTSSVSQELVWGEMAAWFNAIPAGWGPGSPVWDDLDTFQSQLPFFNPNQQEFHDADPHRQQGDNRGPSDSSTSSSSCPMRPFF 424
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi01g0435 424 MobiDBLite consensus disorder prediction 51 79 - -
Mibi01g0435 424 MobiDBLite consensus disorder prediction 295 312 - -
Mibi01g0435 424 Pfam AP2 domain 197 245 IPR001471 GO:0003700|GO:0006355
Mibi01g0435 424 MobiDBLite consensus disorder prediction 263 293 - -
Mibi01g0435 424 PRINTS Ethylene responsive element binding protein signature 197 208 IPR001471 GO:0003700|GO:0006355
Mibi01g0435 424 PRINTS Ethylene responsive element binding protein signature 219 235 IPR001471 GO:0003700|GO:0006355
Mibi01g0435 424 MobiDBLite consensus disorder prediction 12 40 - -
Mibi01g0435 424 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF061 19 376 - -
Mibi01g0435 424 SUPERFAMILY DNA-binding domain 196 254 IPR016177 GO:0003677
Mibi01g0435 424 MobiDBLite consensus disorder prediction 259 324 - -
Mibi01g0435 424 MobiDBLite consensus disorder prediction 1 79 - -
Mibi01g0435 424 FunFam Ethylene-responsive transcription factor 2 195 254 - -
Mibi01g0435 424 SMART rav1_2 196 259 IPR001471 GO:0003700|GO:0006355
Mibi01g0435 424 ProSiteProfiles AP2/ERF domain profile. 196 253 IPR001471 GO:0003700|GO:0006355
Mibi01g0435 424 MobiDBLite consensus disorder prediction 382 424 - -
Mibi01g0435 424 CDD AP2 195 255 IPR001471 GO:0003700|GO:0006355
Mibi01g0435 424 Gene3D AP2/ERF domain 196 254 IPR036955 GO:0003700|GO:0006355
Mibi01g0435 424 MobiDBLite consensus disorder prediction 405 424 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi01g0435 Mibi-ChrMibi01 4213615 4214889 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi01g0435 1 375 AP2-EREBP Transcription Factor Family AT2G20880 41.344 4.06e-62 202
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Mibi01g0435 AP2 3.1e-13 CL0081