Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi01g0407 ATGGGAAGAGCACCTTGCTGTGACAAAGACGGACTCAAGAAGGGTCCATGGACCCCAGAGGAAGACCTAAAGCTCATCAACTATATCCACACCCATGGACCCGGCAATTGGCGAACCCTCCCAAAGAATGCTGGACTGCAAAGATGTGGGAAAAGTTGCCGGCTTCGATGGACAAATTACCTGAGACCCGATATCAAGAGGGGGAGGTTCTCCTTTGAGGAAGAAGAGACCATCATTCAGTTACACAGTATCATGGGAAACAAATGGTCGGCGATAGCAGGACGATTACCAGGAAGAACAGACAATGAAATAAAGAACTATTGGAACACCCACATTAGGAAGAGACTGCTTCGAATGGGAATAGACCCAGTGACTCATGCCCCACGCCTTGACCTTGTAGAGATATCATCCATTCTAAGGTCAGCGCTGACCAACCACCAATCACTACTGAATCTGCAAAGTTTAATGGGGGCTCAAGCTTTGATGAACCCAGAACTGTTGAGGCTGGCCACCACTCTGTTAGCTCTCAAAAACCAGAGCCCAGATTTGGTATCACAGAATCTACAACAACTCCTGCAGGCAGGGAATCAACAAGTAGAGAGTAGCCAAGCCTCCCCATTATTCAGTCATCACATGCCAATAACTCAGACCACCAATATGCAAGAAGGCCCCTCAGGCAATATCACAAACATGAGCTCTTCAACTTCTTCACTTCAGAATCCATCAATTCCTTCATATTTATGTGACGAGAATCTCATTAGTCCGCAACAAAACCAAGTTGATATGCAAGGAATAAAACAAACATTGGGGTATGAGTCAGTTCTGTCAACGCCTTTGTCTAGCCCGACGCCATTGAATTCATCGTCCACTTATGTGAGTAATAGCAGCGCTGAGGAACAGAGGGATACATATTGCAGCGACTTCTTCAAGTTTGAAATTCCTGAGAGTCTCGACATCAGTGATTTCTTGTAA 972 0.4578 MGRAPCCDKDGLKKGPWTPEEDLKLINYIHTHGPGNWRTLPKNAGLQRCGKSCRLRWTNYLRPDIKRGRFSFEEEETIIQLHSIMGNKWSAIAGRLPGRTDNEIKNYWNTHIRKRLLRMGIDPVTHAPRLDLVEISSILRSALTNHQSLLNLQSLMGAQALMNPELLRLATTLLALKNQSPDLVSQNLQQLLQAGNQQVESSQASPLFSHHMPITQTTNMQEGPSGNITNMSSSTSSLQNPSIPSYLCDENLISPQQNQVDMQGIKQTLGYESVLSTPLSSPTPLNSSSTYVSNSSAEEQRDTYCSDFFKFEIPESLDISDFL 323
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi01g0407 323 MobiDBLite consensus disorder prediction 278 297 - -
Mibi01g0407 323 Pfam Myb-like DNA-binding domain 67 111 IPR001005 -
Mibi01g0407 323 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
Mibi01g0407 323 ProSiteProfiles Myb-like domain profile. 62 112 IPR001005 -
Mibi01g0407 323 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 65 IPR017930 -
Mibi01g0407 323 SMART sant 66 114 IPR001005 -
Mibi01g0407 323 SMART sant 13 63 IPR001005 -
Mibi01g0407 323 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
Mibi01g0407 323 Gene3D - 69 116 - -
Mibi01g0407 323 SUPERFAMILY Homeodomain-like 11 108 IPR009057 -
Mibi01g0407 323 Gene3D - 13 66 - -
Mibi01g0407 323 FunFam MYB-related transcription factor 13 66 - -
Mibi01g0407 323 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 66 116 IPR017930 -
Mibi01g0407 323 FunFam Transcription factor MYB39 69 130 - -
Mibi01g0407 323 CDD SANT 16 61 IPR001005 -
Mibi01g0407 323 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 1 266 - -
Mibi01g0407 323 CDD SANT 69 112 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi01g0407 Mibi-ChrMibi01 3972330 3973532 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi01g0407 1 323 MYB Transcription Factor Family AT4G21440 52.247 4.77e-108 317
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Mibi01g0407 Myb_DNA-binding 8.5e-16 CL0123