Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi01g0402 ATGGTGAGAAGCCCCTTTTACGACAGAAATGGAGTGAAGAAAGGTGCGTGGAGCAAAGAAGAGGATGAAAAACTGAGAGCCTTTGTTCTGGGACATGGTCATACCAATTGGCGTCAACTACCCAAGCTTGCAGGTTTAGCAAGGTGCGGAAAAAGTTGTAGACTTCGTTGGATGAACTACCTGAGGCCAAATCTAAAACACGGCAACTACACTCCAGAGGAGGAGCAACTCATCATCAAATACCACCGACAACTTGGGAATAAATGGTCATTGATTGCTGAGAAACTACCAGGACGAACGGACAATGATATAAAAAACCACTGGCACAGCCACCTCAAGAAGAACTTAAACCACACTGACACTAGAAAGGAGGTTAAATATTTGAAGACGGCTGAGTATACAGAATCTGAACGCCCATGTGAGTTCGTGGGTTCTGAATCAGAAAGTCCACACCATATACTTGAAAGCTCATGGGTCTGGCCCAATTCTTCAGAACCATGCGATAACTGTACCCAAGAGAACCACTCACTCTCAGACTCAAGCGGCGTCAAGTCTTGTAGGGAAGATCAAGACACCAGTGTTGCTTCTTCCTGGGAAGCACCTCAAGAACTCATAAGCAGCGATTTTTGGAGTAGACCTTTTTTAGTGGAAAATACATCTGCTTATGACATTTCCCCCCAAATGTTTTGGTACCCTTATGAGGGTACTGATGATTTGAGTGACCTACACGGTATTCTAGACTGGTGA 747 0.4471 MVRSPFYDRNGVKKGAWSKEEDEKLRAFVLGHGHTNWRQLPKLAGLARCGKSCRLRWMNYLRPNLKHGNYTPEEEQLIIKYHRQLGNKWSLIAEKLPGRTDNDIKNHWHSHLKKNLNHTDTRKEVKYLKTAEYTESERPCEFVGSESESPHHILESSWVWPNSSEPCDNCTQENHSLSDSSGVKSCREDQDTSVASSWEAPQELISSDFWSRPFLVENTSAYDISPQMFWYPYEGTDDLSDLHGILDW 248
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi01g0402 248 ProSiteProfiles Myb-like domain profile. 62 112 IPR001005 -
Mibi01g0402 248 Gene3D - 7 67 - -
Mibi01g0402 248 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 1 176 - -
Mibi01g0402 248 SMART sant 13 63 IPR001005 -
Mibi01g0402 248 SMART sant 66 114 IPR001005 -
Mibi01g0402 248 Gene3D - 68 139 - -
Mibi01g0402 248 FunFam Transcription factor RAX3 7 67 - -
Mibi01g0402 248 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 62 116 IPR017930 -
Mibi01g0402 248 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
Mibi01g0402 248 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 61 IPR017930 -
Mibi01g0402 248 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
Mibi01g0402 248 Pfam Myb-like DNA-binding domain 68 112 IPR001005 -
Mibi01g0402 248 CDD SANT 16 61 IPR001005 -
Mibi01g0402 248 SUPERFAMILY Homeodomain-like 11 108 IPR009057 -
Mibi01g0402 248 CDD SANT 69 112 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi01g0402 Mibi-ChrMibi01 3922372 3923368 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi01g0402 1 139 MYB Transcription Factor Family AT1G06180 58.571 1.94e-52 169
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Mibi01g0402 Myb_DNA-binding 3.1e-12 CL0123