Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi01g0401 ATGGTGAGGACTCCTTCATACGATAAGAGTGGACTGAAAAAAGGGACATGGACACTCGAGGAAGACAGGAAGCTAATTGCTTATGTTACTAGGTATGGCTGCTGGAATTGGCGCCAACTCCCCCGCTTTGCAGGACTGGAGAGGTGTGGAAAGAGTTGTAGGCTGAGGTGGATGAATTATCTGAGACCTAACATCAAAAGAGGCAATTACACTCCTCAAGAAGAGGACCACATCATTAAACTCCACAAAGAGCTCGGCAATAAATGGTCGGCGATTGCAGCTCATTTGCCCGGAAGAACTGATAACGAAATAAAGAACCACTGGCACACCACCCTCAAAAAGCTATCTCAACACACCTCTCCCACCCGATCACATGATAAATCTAAAAACTCCTCAAAAAAAACTTCCCCTTCTTCCCAAGCACACACTTCTTCCTCCTCCTCCTCCCAGATCGAAATATTAGATTCTGGCCCATTGTCTCCACAGTCATATTCCTCTTCAACTAATTCAAGTGTGCAGGATGACTTATCTTTTATCGATGCTCTCACAGAACCTGGGACGACCCAAAGTTTCTGGGCCCACCTAAATTTGGATGACATCTTTTGCGATCCTACACAAACAATGCCACTGCACGCTACTCCTCAAAATCCGTCTATTCCTCATAACGCCCTCGTGGAGGATGATTTTGCTCTCCTGGATTCATTTTCAGAGGCGCCTTTTGGAAGTTTTCTGATGGAGCAAATGTGTGACGTGTCTTACCCTCCCACACAGCCACAAGCCTCATTGGGCGATGATTTAGAATATCTTTATCCACTTTATGATATAGATCTCTGGAGTCAAAGTACGTAA 849 0.4523 MVRTPSYDKSGLKKGTWTLEEDRKLIAYVTRYGCWNWRQLPRFAGLERCGKSCRLRWMNYLRPNIKRGNYTPQEEDHIIKLHKELGNKWSAIAAHLPGRTDNEIKNHWHTTLKKLSQHTSPTRSHDKSKNSSKKTSPSSQAHTSSSSSSQIEILDSGPLSPQSYSSSTNSSVQDDLSFIDALTEPGTTQSFWAHLNLDDIFCDPTQTMPLHATPQNPSIPHNALVEDDFALLDSFSEAPFGSFLMEQMCDVSYPPTQPQASLGDDLEYLYPLYDIDLWSQST 282
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi01g0401 282 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 61 IPR017930 -
Mibi01g0401 282 SMART sant 13 63 IPR001005 -
Mibi01g0401 282 SMART sant 66 114 IPR001005 -
Mibi01g0401 282 SUPERFAMILY Homeodomain-like 11 108 IPR009057 -
Mibi01g0401 282 FunFam MYB-related transcription factor 13 66 - -
Mibi01g0401 282 Gene3D - 69 144 - -
Mibi01g0401 282 MobiDBLite consensus disorder prediction 133 170 - -
Mibi01g0401 282 MobiDBLite consensus disorder prediction 114 170 - -
Mibi01g0401 282 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
Mibi01g0401 282 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 1 177 - -
Mibi01g0401 282 CDD SANT 16 61 IPR001005 -
Mibi01g0401 282 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
Mibi01g0401 282 Pfam Myb-like DNA-binding domain 67 111 IPR001005 -
Mibi01g0401 282 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 62 116 IPR017930 -
Mibi01g0401 282 Gene3D - 6 67 - -
Mibi01g0401 282 ProSiteProfiles Myb-like domain profile. 62 112 IPR001005 -
Mibi01g0401 282 CDD SANT 69 112 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi01g0401 Mibi-ChrMibi01 3901425 3902519 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi01g0401 1 203 MYB Transcription Factor Family AT1G06180 50.980 1.18e-56 181
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Mibi01g0401 Myb_DNA-binding 1.4e-11 CL0123