Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi01g0400 ATGATGAAGGACGACGCAGTTTATATATATGCACTTAACTGCTTCACCGATTTATTAGCATTCAGAGGAGATGGAACCCAAACAATAGACAGAACAGGGTCCCTTGCTATAAATTGTGAGACAATAATTAAGGTAAAGGAATTGAAGATGGTGAGAACTCCAAGCTGTGACAAAAGTGGACTGAAGAAAGGTACTTGGACACCGGAGGAAGATAGGAAGCTAATTGCTTATGTTACTAGGTATGGCTGCTGGAATTGGCGCCAGCTTCCCAAGTACGCAGGCCTAGCAAGGTGTGGAAAGAGTTGCAGACTTCGATGGCTAAATTACCTGAGGCCCAACATCAAAAGAGGCAATTACACTCCCGAAGAAGAACAACTTATCATCCAGCTCCACCGCCAGCTGGGAAACAGATGGTCTGCTATTGCTGCAAAGCTGCCAGGAAGAACGGACAATGACATAAAGAACTACTGGCACACGAATCTCAAGAAGAAGTCGGGAAAACAGGCCCAAGTAGAAGAGAATGAACCATCTTCAGGTGAAAATACGGATCAAGTTGTTAACAACACTAGCGGCGGTGGTTGTGGTGATGATGATAATAATATGACGACGGGTGATTCAAATCAGTCGTCACCGTCGAGTATAACCACAGAAACAAGGACAAGAGGCAGCAATGAATCAAGTATGGTAGTGGAAGGTGATAATGATGATGATGATCAGGTTGCTTTTCTGAATGCATTGGCAGACGTAAACTTCTGGACAGACCCTTTTGTGGCTGACATTTTCTGCGACCCTACACAAACAGGGTCATTCCCACCCGTTTTATCTGATCTTCATCAATCCGATTACTTTACTATGGATCCATCGTGTGATGCACTGCTTTGGACTCAGAATCATGTTTGCGATCAATATTCTGGCTTATTCTCATGA 927 0.4391 MMKDDAVYIYALNCFTDLLAFRGDGTQTIDRTGSLAINCETIIKVKELKMVRTPSCDKSGLKKGTWTPEEDRKLIAYVTRYGCWNWRQLPKYAGLARCGKSCRLRWLNYLRPNIKRGNYTPEEEQLIIQLHRQLGNRWSAIAAKLPGRTDNDIKNYWHTNLKKKSGKQAQVEENEPSSGENTDQVVNNTSGGGCGDDDNNMTTGDSNQSSPSSITTETRTRGSNESSMVVEGDNDDDDQVAFLNALADVNFWTDPFVADIFCDPTQTGSFPPVLSDLHQSDYFTMDPSCDALLWTQNHVCDQYSGLFS 308
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi01g0400 308 FunFam Transcription factor RAX3 56 116 - -
Mibi01g0400 308 MobiDBLite consensus disorder prediction 163 235 - -
Mibi01g0400 308 ProSiteProfiles Myb-like domain profile. 111 161 IPR001005 -
Mibi01g0400 308 SUPERFAMILY Homeodomain-like 60 157 IPR009057 -
Mibi01g0400 308 ProSiteProfiles Myb-like domain profile. 58 110 IPR001005 -
Mibi01g0400 308 Pfam Myb-like DNA-binding domain 116 161 IPR001005 -
Mibi01g0400 308 Pfam Myb-like DNA-binding domain 63 110 IPR001005 -
Mibi01g0400 308 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 111 165 IPR017930 -
Mibi01g0400 308 MobiDBLite consensus disorder prediction 171 229 - -
Mibi01g0400 308 CDD SANT 118 161 IPR001005 -
Mibi01g0400 308 CDD SANT 65 110 IPR001005 -
Mibi01g0400 308 Gene3D - 118 188 - -
Mibi01g0400 308 Gene3D - 55 116 - -
Mibi01g0400 308 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 50 232 - -
Mibi01g0400 308 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 58 110 IPR017930 -
Mibi01g0400 308 SMART sant 62 112 IPR001005 -
Mibi01g0400 308 SMART sant 115 163 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi01g0400 Mibi-ChrMibi01 3831109 3832562 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi01g0400 50 259 MYB Transcription Factor Family AT2G31180 48.113 1.00e-62 197
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Mibi01g0400 Myb_DNA-binding 1.3e-13 CL0123