Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi01g0399 ATGAACAACATGAAGAAACCATGGTTCTGGATTTCAGTTCTTATCCTCTGCTTCTCTTTTCACATTCATTCTTCTTTTGGAGCTTTTACTGCCATCTCTGCAAATCAGTCTCTTTCTGGCGATCAAACTCTAATCTCTCCGGAAGGTGACTTTGAATTGGGATTCTTCAAGCCAGGTAATTCTTCTAATTACTACATAGGCATATGGTACAACTTCAAGGTCTCTGAAAAGACCTGTGTTTGGGTAGCTAACAGAAATACACCTCTCCCTGACAAATATTCAGCCAAGTTAGCAATATCGGGTGGTAATTTGGTTCTCTTTGACGGGCCTCAAAAGATTGTTTGGTCAAAAAACTTTACTTCTCCATCCTTAAGTTTTGTAGAGGCTGCCCTCCTTGATAGTGGGAACCTAGTTTTAAGAGATAGGCCTAATGCAACAGATCAGTTCCTATGGCAGAGCTTTGATAATCCAACTGATACATGGCTTCCAGGAGGTAAAATAAGATTAAATAATAAAACAAAGCAGCCTCAATATCTCACTTCAGGGAAGAACAAGGAGGACCCTGCAGAAGGCCTTTTCTCTTTAGAGCTAGACCCCAAAGGAAGCACTGCCTATCTCATTCTTTGGAATAAGTCTGAACAGTATTGGACCAGTGGTTCTTGGAATGGACAAATTTTCAGTTTGGTACCTGAAATGAGGTTAAATTATATTTACAATTTCACATTCGTGACAAACGAAAATGAGAGCTATTTCACCTACACTGTGTATAATAGTTCTATCAAATCAAGATTTGTGATGGATGTCTCAGGGCAAATTAAGCAATTGACATGGTTGGAGGCTAGCCAGCAATGGAACTTGTTTTGGTCACAACCAAGGCAACAATGTGAGGTTTATGCATACTGTGGTGCATTTGGAATTTGTAACGAGAATTCCATGCCATCTTGTACTTGTTTACCTGGCTTTGAGACGAAGTTCCAGAGTGATTGGACTCTGATGGATTACTCAGGTGGTTGTAAGAGGAGAACAAAGTTGCAATGTGAGAACTCAAATTATTTGAATCGAAAGAAGGACGAGTTCCAAGCAATGCCCAACATGAAGTTACCTACAGCTTCTCTATCTGTTAGAGCAGGGAATGCAGAGGAATGCCAATCAAACTGCTTGAGCAACTGCTCCTGTGCTGCTTATGCATATGATAGTAATGGGTGTTTAATTTGGAATGATGATCTCTTGAATCTGCAACAACTGTCCCAGGATGATAGTAATGGAGAAACTTTGTATCTCAGGCTTGCGGCTTCTGAGTTTCCTGACTCTAAAAACAGTAAGGGTATGATTATTGGTATTGTTGCTGGCTCGGTTGGAGGCATAGGGTTTCTCCTAGCTATTCTTCTACTTGTGATGCTGAGGCGAAGAAACAGAATTGTTGGAACAGGAAAATCCGTGGAGGGTTCATTGATGGCATATGGGTACAGAGATTTACAAAACGCGACAAAGAATTTCTCAGATAAGTTAGGAGGAGGAGGTTTTGGTTCTGTGTTCAAGGGAACATTGTCAGATTCTAGTGTTATAGCAGTGAAGAAGCTTGAAAGCATTGGCCAAGGTGAGAAGCAGTTCCGTACAGAAGTAAGTACAATTGGGACAGTCCAACATGTAAATTTGGTCCGACTTAGAGGGTTCTGTTCTGAAGGAGCGAGAAAACTACTTGTCTATGATTACATGCCAAATAGTTCTTTGGATTCCCACCTTTTTAAGGAAAAGAATTCTAAGATATTGGACTGGAAAATGAGGTACCAAATTGCTCTTGGAACAGCGAGGGGGTTAACTTATCTTCATGAAAAGTGTAGAGATTGCATTATACATTGTGACATCAAACCAGAAAACATTCTCCTTGATGCTGATTTTTGTCCAAAAGTTGCTGCCTTTGGCCTTGCAAAGCTAGTTGGACGAGATTTTAGCAGGGTTCTAACAACCATGAGAGGAACAAGAGGTTATCTTGCACCTGAGTGGATATCTGGGGTGGCCATCACAGCCAAAGCGGACGTTTACAGCTATGGGATGATGCTTTTTGAACTTGTATCAGGTAGGAGAAACTCTGAATCATCTGAAGATGGCCAAGTTAAGTTCTTTCCTACGTGGGCTACAAATGTTGTGATCCAAGGTGGAAATATGCTCAGCCTATTAGACCCAAGGTTGAAGGGAGATGCAGACATGGATCAGGTGACACGAATATTAAAAGTTGCTGCTTGGTGTGTCCAAGACGATGAAACTCACAGGCCATCCATGGGTCAGGTGGTTCAAATCCTTGAGGGGGTGTTGGATGCGAATTTGCCTCCAGTTCCAAGATCACTCCAATTGTTTGTTGAAGACCAAGCGAACATAGTGTTCTTCACTGATTCAAATTCAAGCTCCAGTCAAAGCTCACAGGTGAGGAGCAACGTTTCAACAGCCTCCTCTAATACCCAAAGCAATCTCTCAACTTCTGCTTCACGAGAGATGGGACAAAATGTCAAAACCTTGATGCATGGAGTGGAGGAAATTTGTGCAAATTTCGATTACGTGCGAAAAGACAGGGAGTTTACGCGGGAGCTTGATGGGTTTTACTTTCATTTTGATGAGTTCTCTGATTCCGAACTCGAGCTCCAACACGATGGAGGCGATTCTGCTTTAGTTTCTGGAGTGTTGGAGGCTTTGGTTGCTTGGTTCGTCATGGTTCTCTCACCCCTGGACGATCTTCGTTTTGATCCTTGA 2745 0.42 MNNMKKPWFWISVLILCFSFHIHSSFGAFTAISANQSLSGDQTLISPEGDFELGFFKPGNSSNYYIGIWYNFKVSEKTCVWVANRNTPLPDKYSAKLAISGGNLVLFDGPQKIVWSKNFTSPSLSFVEAALLDSGNLVLRDRPNATDQFLWQSFDNPTDTWLPGGKIRLNNKTKQPQYLTSGKNKEDPAEGLFSLELDPKGSTAYLILWNKSEQYWTSGSWNGQIFSLVPEMRLNYIYNFTFVTNENESYFTYTVYNSSIKSRFVMDVSGQIKQLTWLEASQQWNLFWSQPRQQCEVYAYCGAFGICNENSMPSCTCLPGFETKFQSDWTLMDYSGGCKRRTKLQCENSNYLNRKKDEFQAMPNMKLPTASLSVRAGNAEECQSNCLSNCSCAAYAYDSNGCLIWNDDLLNLQQLSQDDSNGETLYLRLAASEFPDSKNSKGMIIGIVAGSVGGIGFLLAILLLVMLRRRNRIVGTGKSVEGSLMAYGYRDLQNATKNFSDKLGGGGFGSVFKGTLSDSSVIAVKKLESIGQGEKQFRTEVSTIGTVQHVNLVRLRGFCSEGARKLLVYDYMPNSSLDSHLFKEKNSKILDWKMRYQIALGTARGLTYLHEKCRDCIIHCDIKPENILLDADFCPKVAAFGLAKLVGRDFSRVLTTMRGTRGYLAPEWISGVAITAKADVYSYGMMLFELVSGRRNSESSEDGQVKFFPTWATNVVIQGGNMLSLLDPRLKGDADMDQVTRILKVAAWCVQDDETHRPSMGQVVQILEGVLDANLPPVPRSLQLFVEDQANIVFFTDSNSSSSQSSQVRSNVSTASSNTQSNLSTSASREMGQNVKTLMHGVEEICANFDYVRKDREFTRELDGFYFHFDEFSDSELELQHDGGDSALVSGVLEALVAWFVMVLSPLDDLRFDP 914
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi01g0399 914 CDD STKc_IRAK 503 769 - -
Mibi01g0399 914 Gene3D Hepatocyte Growth Factor 350 431 - -
Mibi01g0399 914 MobiDBLite consensus disorder prediction 798 830 - -
Mibi01g0399 914 SUPERFAMILY alpha-D-mannose-specific plant lectins 78 223 IPR036426 -
Mibi01g0399 914 PANTHER OS07G0415500 PROTEIN 13 779 - -
Mibi01g0399 914 SMART ntp_6 354 429 IPR003609 -
Mibi01g0399 914 Pfam Protein kinase domain 500 765 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi01g0399 914 ProSiteProfiles PAN/Apple domain profile. 346 430 IPR003609 -
Mibi01g0399 914 Gene3D Transferase(Phosphotransferase) domain 1 572 776 - -
Mibi01g0399 914 Pfam D-mannose binding lectin 78 183 IPR001480 -
Mibi01g0399 914 SUPERFAMILY Hairpin loop containing domain-like 355 417 - -
Mibi01g0399 914 SMART blect_4 35 157 IPR001480 -
Mibi01g0399 914 SUPERFAMILY Protein kinase-like (PK-like) 482 805 IPR011009 -
Mibi01g0399 914 Pfam S-locus glycoprotein domain 216 324 IPR000858 GO:0048544
Mibi01g0399 914 Gene3D Phosphorylase Kinase; domain 1 465 571 - -
Mibi01g0399 914 ProSiteProfiles Protein kinase domain profile. 497 771 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi01g0399 914 PIRSF SRK 2 825 IPR024171 GO:0004674
Mibi01g0399 914 FunFam Receptor-like protein kinase 4 465 571 - -
Mibi01g0399 914 SMART serkin_6 497 766 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi01g0399 914 CDD B_lectin 35 157 IPR001480 -
Mibi01g0399 914 FunFam Serine/threonine-protein kinase 572 775 - -
Mibi01g0399 914 Gene3D - 28 154 IPR036426 -
Mibi01g0399 914 CDD PAN_AP_plant 342 430 - -
Mibi01g0399 914 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 25 154 - -
Mibi01g0399 914 Pfam PAN-like domain 354 411 IPR003609 -
Mibi01g0399 914 ProSitePatterns Protein kinases ATP-binding region signature. 503 526 IPR017441 GO:0005524
Mibi01g0399 914 ProSitePatterns Serine/Threonine protein kinases active-site signature. 617 629 IPR008271 GO:0004672|GO:0006468
Mibi01g0399 914 ProSiteProfiles Bulb-type lectin domain profile. 29 152 IPR001480 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi01g0399 Mibi-ChrMibi01 3818861 3823477 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi01g0399 478 777 Receptor kinase-like Gene Family AT5G20050 43.038 1.23e-76 256
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Mibi01g0399 Pkinase 1.4e-45 CL0016