Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi01g0395 ATGAAGAACTGTGAGCTTTGCAAGGCACCGGCAAGGACATATTGCGAGTCCGACCAGGCTAGCTTGTGTTGGAAATGCGACGCTAAGGTCCATGGAGCCAACTTCCTGGTAACGAGGCACTCCAGGACTCTTCTCTGCCATTCCTGTCAGTGTCTTACTCCATGGAAAGCTTCTGGCGCCAAGCTCGGAAACACCCTTTCTCTCTGCGAAAGTTGTGCCGGTGGAATGAAGGATATTAGCGAAGAAGGGGACGAGAGCGAAGGTGATAATGACGGTGACACAAACGATGATCTCGACGACGACGACGAAGATGATGACGACAGCAGTGGCGGCGACGAGGATGGAGATAATCAGGTGGTTCCCTTGTCCTCCACACCGCCTCCGCCACCTTCAAATTCCTCGAGTAGCGAAGAGTCTAACAGCAGATGTAATAGCAGTAACAGGGTTATTTCTGAAACGGCGAGCACTATAACGCTGAAACGCAAGCGTGAGGAAGCATCGGATCTCAATTTCCAGGATGGTTGGAAGTGGTGGTGTAATAAAGATGGGAAAGGCGGGGAGCTAAAAAAGGAGGTGGCATGGTTGGAACATGAAGGCGGCGAAGGATCTTCGGAGGTATCGCCGAGAGAAAGGGAAATCGGACCGGCGACCTTGAAGGAATCCAATGATGCCCAAACGCCGGAAGCCGTTTGA 693 0.5209 MKNCELCKAPARTYCESDQASLCWKCDAKVHGANFLVTRHSRTLLCHSCQCLTPWKASGAKLGNTLSLCESCAGGMKDISEEGDESEGDNDGDTNDDLDDDDEDDDDSSGGDEDGDNQVVPLSSTPPPPPSNSSSSEESNSRCNSSNRVISETASTITLKRKREEASDLNFQDGWKWWCNKDGKGGELKKEVAWLEHEGGEGSSEVSPREREIGPATLKESNDAQTPEAV 230
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi01g0395 230 MobiDBLite consensus disorder prediction 82 113 - -
Mibi01g0395 230 MobiDBLite consensus disorder prediction 79 155 - -
Mibi01g0395 230 CDD Bbox1_BBX-like 4 45 - -
Mibi01g0395 230 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 10 3 160 - -
Mibi01g0395 230 MobiDBLite consensus disorder prediction 198 230 - -
Mibi01g0395 230 Pfam B-box zinc finger 2 42 IPR000315 GO:0008270
Mibi01g0395 230 MobiDBLite consensus disorder prediction 198 217 - -
Mibi01g0395 230 MobiDBLite consensus disorder prediction 134 155 - -
Mibi01g0395 230 SMART bboxneu5 1 45 IPR000315 GO:0008270
Mibi01g0395 230 ProSiteProfiles Zinc finger B-box type profile. 1 45 IPR000315 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi01g0395 Mibi-ChrMibi01 3785613 3786406 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi01g0395 2 112 C2C2-CO-like Transcription Factor Family AT4G27310 51.351 1.95e-33 118
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Mibi01g0395 zf-B_box 1.9e-06 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi01g0395 01 3785613 3786406 Mibi07g0629 07 7716337 7717228 CCT
Mibi01g0395 01 3785613 3786406 Mibi01g0395 01 3785613 3786406 ECH