Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi01g0389 ATGAATCCCGGCAACCTTCGATGTTCTCAGGTCCCAATCCAGAATCCCCAGACATCCTCCTTCAACATTGATCATAACGACGCGAATGTAACGAGAGTAGACGCCTTGGGAGTCAACGCTTCTGGCTCCATCCTTCAACACACTGGTATCTTCCATCCTCCAATCATGAGCACAATTTGCATGCAGAAGTTAGAGAAAGGCCATACTAAAGGGGATGGATCTAAGTCCCTGGCAGAGACTCTGGCGAGATGGAAAGAATATAATGCCCAGCTTGATTCTTGCAAAGATGCAGATAAGCCAATTCGGAAAGTTCCTGCCAAAGGATCGAAGAAGGGATGCATGAAAGGTAAAGGAGGGCCTGAGAACTCTCGTTGTAACTACAGGGGCGTGAGGCAGAGGACATGGGGCAAGTGGGTTGCGGAAATTCGAGAGCCAAACAGAGGAAGTAGGCTCTGGTTGGGTACATTTCCCACTGCCATTGGAGCTGCTCTTGCCTATGATGAAGCAGCTAGAGCAATGTATGGTTCTTTCGCTCGACTCAACTTTCCCAATGTTTCAGTCTCCAGTTTTTCTAATGAATCTCCAAGAGATTCATTAGTTGCTAGTCAATCTGATTCTGCAGTGCCAACTGAGTCTGTGATGTCCCCGACCATTTCTGGCTTGGGCGAGTTAGATAACACTGAAATGAAACCTGCTCCCTTGAATGTAAAAGTTGAGGAGGGGGAAGTTGAACTGAGGCTCAATTCCTCCAAGCTTTCATGA 762 0.4738 MNPGNLRCSQVPIQNPQTSSFNIDHNDANVTRVDALGVNASGSILQHTGIFHPPIMSTICMQKLEKGHTKGDGSKSLAETLARWKEYNAQLDSCKDADKPIRKVPAKGSKKGCMKGKGGPENSRCNYRGVRQRTWGKWVAEIREPNRGSRLWLGTFPTAIGAALAYDEAARAMYGSFARLNFPNVSVSSFSNESPRDSLVASQSDSAVPTESVMSPTISGLGELDNTEMKPAPLNVKVEEGEVELRLNSSKLS 253
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi01g0389 253 Pfam AP2 domain 125 175 IPR001471 GO:0003700|GO:0006355
Mibi01g0389 253 CDD AP2 125 185 IPR001471 GO:0003700|GO:0006355
Mibi01g0389 253 MobiDBLite consensus disorder prediction 193 235 - -
Mibi01g0389 253 PANTHER DEHYDRATION-RESPONSIVE ELEMENT-BINDING PROTEIN 2C 64 212 - -
Mibi01g0389 253 PRINTS Ethylene responsive element binding protein signature 127 138 IPR001471 GO:0003700|GO:0006355
Mibi01g0389 253 PRINTS Ethylene responsive element binding protein signature 149 165 IPR001471 GO:0003700|GO:0006355
Mibi01g0389 253 SMART rav1_2 126 189 IPR001471 GO:0003700|GO:0006355
Mibi01g0389 253 MobiDBLite consensus disorder prediction 193 222 - -
Mibi01g0389 253 MobiDBLite consensus disorder prediction 100 125 - -
Mibi01g0389 253 SUPERFAMILY DNA-binding domain 126 183 IPR016177 GO:0003677
Mibi01g0389 253 FunFam Ethylene-responsive transcription factor 2 125 184 - -
Mibi01g0389 253 ProSiteProfiles AP2/ERF domain profile. 126 183 IPR001471 GO:0003700|GO:0006355
Mibi01g0389 253 Gene3D AP2/ERF domain 126 185 IPR036955 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi01g0389 Mibi-ChrMibi01 3749516 3751260 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi01g0389 70 183 AP2-EREBP Transcription Factor Family AT2G40350 65.254 1.77e-50 161
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Mibi01g0389 AP2 3.1e-14 CL0081