Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi01g0383 ATGTTTTCCGGCGTCACCCTTCAGTCCATTCTCTCCCTCAATCCCTCTCTCCATCTTCCCTCTGTTCCCTTCCACTTTGCAGACAACAACACCCCTTCCATCGTCCCCAAATCTGAGCCTAATCTCTTCGAATACCTCCCCACAACTTCTCATTATCCCTTCGATTTCTTCTCCACCACCCATTGCCCTCCCACCTTTTACGATCCATCTTCCACCTTCCTCCCTCTCCCTCTCCCTCAACTCCATTCCCTCGAGTCCTTCCCTCTTAAGCGTCCTCGCTTCGACTCCCTCATTCCCACTCCGCCGCAAATCTCCTCTCCGATGGATTCTCCCGCCGGAGACAATTCCTCTCCGGTGATCCCTCAGAGCAACCTGGCTCGTCAGCGGAGGCAGAAGCTTAGCGATAAGACTCGCTGCTTGCAGAAATTGATGCCGTGGGACAAGAAGATGGACCAGGCCACGCTTCTTGAGGAGGCCTGCAAGTACGTCAAATTCCTTCAGGCTCAGTTCAACGCTCTTCAATCCATGCCTTCCTATTCGCCTTTGCAGCCTCACTCTTCCGAATCCTCCGTTCAGAACGGCCACGTGTTCGGCGATTTGGAGAGGCTGAATCGTAACCAGGTTTTGCAGGTTCTGGTGAACTCGCCTGTCGCTCAAACCAGGCTTTACTCCCAAGGCTTCTGTGTGTTCTCCATCGAACAGTTAACTTTGCTGAGCAACGTCACTGGGAAGAGGCTTCTTCTTCCCCAAGTCATGTCCGATAACGCTTCTTCTAAATCCTTCTTCAACTGA 792 0.5253 MFSGVTLQSILSLNPSLHLPSVPFHFADNNTPSIVPKSEPNLFEYLPTTSHYPFDFFSTTHCPPTFYDPSSTFLPLPLPQLHSLESFPLKRPRFDSLIPTPPQISSPMDSPAGDNSSPVIPQSNLARQRRQKLSDKTRCLQKLMPWDKKMDQATLLEEACKYVKFLQAQFNALQSMPSYSPLQPHSSESSVQNGHVFGDLERLNRNQVLQVLVNSPVAQTRLYSQGFCVFSIEQLTLLSNVTGKRLLLPQVMSDNASSKSFFN 263
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi01g0383 263 Pfam Helix-loop-helix DNA-binding domain 127 167 IPR011598 GO:0046983
Mibi01g0383 263 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 120 180 IPR036638 GO:0046983
Mibi01g0383 263 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 117 166 IPR011598 GO:0046983
Mibi01g0383 263 SMART finulus 123 172 IPR011598 GO:0046983
Mibi01g0383 263 PANTHER TRANSCRIPTION FACTOR HEC3-RELATED 120 238 IPR045843 GO:0003700|GO:0006355
Mibi01g0383 263 Gene3D - 121 180 IPR036638 GO:0046983
Mibi01g0383 263 MobiDBLite consensus disorder prediction 99 133 - -
Mibi01g0383 263 MobiDBLite consensus disorder prediction 99 128 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi01g0383 Mibi-ChrMibi01 3681136 3681927 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi01g0383 129 242 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G22100 45.299 5.75e-25 98.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Mibi01g0383 HLH 1.4e-05 No_clan