Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi01g0380 ATGAAGATGATTAGATCCAGTTATGCGGTAATCTCTGTGATTCTTCTTTGCGCGTTGGTTAAAGGAGGCTCCGAAGGAAAGAGGTGGGATCTGCATGAGTTTCTCAATGAACATTGTCATTTGTCGTCGTCACTTCCTGAAGATGGAAAACAGTTAGAGCAAGCTTGGAAACATTGTAGGAAAGAGTTGGTAGAGAAGAAGCATGGAAATCAAGAATCTGACTTGCCTCGAACAAAAGCAGCAGGGAGAAGTAAGCAGAGAGCTTCACTTGGAATTGATGATATCCTACGCAAACCCACAGAGTTTCAGGGTACCCAATCCCAAAAGAATTTCCTGGATTGCATCAGAACCAGAACTTCCAATAATCCCGTTTCTCCACAAAATGCTGCTTCTCCACCATCTTTTACCAAGTACTTGACCAGTGGCTGTGAAAGGCTTTTGCTTGCTGATTCACCAAATGGCCAAATCCAACCAACCACTTCTTCTCATTCTCCCTCTCGGTCTTCTTCATCTAAATCTCCATCTCCTCCACCTGCAGTTGAATCTCCAAGCCATGATGCAAAACCTCTTGATTCTCCATCTCTTGATTACCCTTTTGCTTCACCATCGCCACCATCACATCCTGAATCCCCTAAACTTTCCCCAATCATCACTGCACTTTTAGACTCTCCTCCCCCTCCTAAACGTAATAATAACAGAAGCAATGAACTTCTGAAAGTAACGTTTATTGCTTCTATCACGGTATGTGCTATTGCAGCATTGGTCTTAATCTGCCTCTGCTGGGGCGTCAGAACCAACAAAATCGACCAAAACTGCGACGGAGCTACACTAACATTAGCCTCCGGTTATGTTTTTAATGGTCCACATAAGTCTACTGTTTTGGAAAAGTATGGCAACAAAGAATTTACTCGTTCGAACGAAGATGTGGCCGCAAACTCTGAAGGTGTCTCACTAATAACAACTGAGACTAAATCGTTATCTGCAGGACAAATGGCTGTTCATCACCCTACTCTAAAACCACCTCAGGGAAAATCAGCTCCTCCGCCCCCTCAGCCGCCGCCCCCGCCACCACCGCCTGCTCCTCGGGCCCCACCACCTCCACCTCCAGAAGCTAATAAGGTTCCTCCACCTGTTCCTCTTAAACCAATTCAAGGTAAAAATAAACAAGGCAAATCTGGTGAGGGTGCTGAATCAGATGCTCCAAAACCCAAATTGAAGCCATTTTTCTGGGATAAAGTTAATAAAGCTGATCAAGGAATGGTTTGGCAACAGATCAATCAGGGGTCATTCCAGTTCAATGAGGAAATGATAGAGTCTTTATTCGGTTGCGCCAACAATAATCAACGCAAGAAAGAAGCATCCCTTGAACCAGCAATTCAATACATTCAGATTATTGACCCCAGAAAAGCACAGAATATATCAATCCTCTTGCGCGCACTGAATGTGACCACGGAAGAAGTTGTCGATGCCCTGAACGAAGGAACTGAGGTTCCAGTTGAGATCATCCAACCGTTGCTGAGGATGACACTAACAGCAGACGAGGAATTAAAGCTTAGATCATTCTCTGGCAACCTCAATCAACTCGGCCCTGCTGAGAGATTTCTCAAGGTGCTAGTTGACATTCCATTCGCTTTCCAACGACTTGAATCTTTGATGTTCATGTACACCTTTACAGAAGAGGTCTCGAATCTCAAGGACTCCTTAACAACACTAGAGGTTGCCTGCAACAACCTCAGAAAAAACAAGTTATTCCTGAAACTATTAGAAGCAGTTCTAAAAACTGGAAACCGGATGAACGATGGAACCTATCGCGGTGGTGCTCAGGCATTCAAGCTGGACACACTACTGAAACTGTCTGATGTAAAAGGAACTGATGGCAAAACAACTCTATTACACTTCGTGGTTCAGGAGATTATAAGATCTGAGGGCATAAGAGCCGTTCGATCGCAGAAAGCTGACCAATCCAGCGGCTCTAGTGAGAAAACAGAGGACACTTTCATGGATGATGCAAATGAAGAATCAACAGCGGAGCATTATCGTACACTTGGCCTTCAGGTGGTTTCAGGTTTAGGCGATGAGCTGGAAGACGTGAAAAGGGCAGCGATTGTAGATGGTGAGGGCATAACAGTCACAGTTTCAAAACTTGGTCAGTCATTATTGAAGTCAAGAGAGTTCCTCAACCATGAGATGAAGAGTCTTGGTGAAGATTCAGGATTTCGTCGTTGCTTGGAAGGTTTTGTGGAGAAAGCTGACTCAGAGATCACATGGCTGCATGAGGAAGAGAACAGGATAATGTCTCTGGTAAGGAGCACCGCCGATTATTTCCATGGCACAGCAGGAAAAGATGAAGGCTTGCGATTGTTCACAGTGGTACGAGATTTCTTGATAATGCTGGATAAGGCATGTAAAGAAGTTCAAGATACTAGTATGAAATCGGTAAAAGCTTCCATGAAAGAGAGTCCAACTACGTCATCTGTTCCGGAGACCCGGCCGCCAATTGATATTCATCGGCGACTGTTTCCGGCAATCACAGGGCGGCGGATTGGTTTTTCCGATTCCGACGATGAGAGCTCCTCGTCGTCGTCACCGTAG 2592 0.4502 MKMIRSSYAVISVILLCALVKGGSEGKRWDLHEFLNEHCHLSSSLPEDGKQLEQAWKHCRKELVEKKHGNQESDLPRTKAAGRSKQRASLGIDDILRKPTEFQGTQSQKNFLDCIRTRTSNNPVSPQNAASPPSFTKYLTSGCERLLLADSPNGQIQPTTSSHSPSRSSSSKSPSPPPAVESPSHDAKPLDSPSLDYPFASPSPPSHPESPKLSPIITALLDSPPPPKRNNNRSNELLKVTFIASITVCAIAALVLICLCWGVRTNKIDQNCDGATLTLASGYVFNGPHKSTVLEKYGNKEFTRSNEDVAANSEGVSLITTETKSLSAGQMAVHHPTLKPPQGKSAPPPPQPPPPPPPPAPRAPPPPPPEANKVPPPVPLKPIQGKNKQGKSGEGAESDAPKPKLKPFFWDKVNKADQGMVWQQINQGSFQFNEEMIESLFGCANNNQRKKEASLEPAIQYIQIIDPRKAQNISILLRALNVTTEEVVDALNEGTEVPVEIIQPLLRMTLTADEELKLRSFSGNLNQLGPAERFLKVLVDIPFAFQRLESLMFMYTFTEEVSNLKDSLTTLEVACNNLRKNKLFLKLLEAVLKTGNRMNDGTYRGGAQAFKLDTLLKLSDVKGTDGKTTLLHFVVQEIIRSEGIRAVRSQKADQSSGSSEKTEDTFMDDANEESTAEHYRTLGLQVVSGLGDELEDVKRAAIVDGEGITVTVSKLGQSLLKSREFLNHEMKSLGEDSGFRRCLEGFVEKADSEITWLHEEENRIMSLVRSTADYFHGTAGKDEGLRLFTVVRDFLIMLDKACKEVQDTSMKSVKASMKESPTTSSVPETRPPIDIHRRLFPAITGRRIGFSDSDDESSSSSSP 863
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi01g0380 863 Coils Coil 561 581 - -
Mibi01g0380 863 MobiDBLite consensus disorder prediction 117 136 - -
Mibi01g0380 863 Gene3D Formin, FH2 domain 411 825 IPR042201 -
Mibi01g0380 863 MobiDBLite consensus disorder prediction 152 175 - -
Mibi01g0380 863 MobiDBLite consensus disorder prediction 812 836 - -
Mibi01g0380 863 SUPERFAMILY Formin homology 2 domain (FH2 domain) 364 810 - -
Mibi01g0380 863 MobiDBLite consensus disorder prediction 392 406 - -
Mibi01g0380 863 MobiDBLite consensus disorder prediction 341 382 - -
Mibi01g0380 863 Pfam Formin Homology 2 Domain 397 798 IPR015425 -
Mibi01g0380 863 MobiDBLite consensus disorder prediction 151 232 - -
Mibi01g0380 863 PANTHER FORMIN-RELATED 223 847 IPR027643 GO:0003779|GO:0030036|GO:0045010|GO:0051015
Mibi01g0380 863 SMART it6_source 395 813 IPR015425 -
Mibi01g0380 863 MobiDBLite consensus disorder prediction 67 108 - -
Mibi01g0380 863 MobiDBLite consensus disorder prediction 324 406 - -
Mibi01g0380 863 MobiDBLite consensus disorder prediction 812 829 - -
Mibi01g0380 863 MobiDBLite consensus disorder prediction 67 81 - -
Mibi01g0380 863 ProSiteProfiles Formin homology-2 (FH2) domain profile. 395 824 IPR015425 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi01g0380 Mibi-ChrMibi01 3666207 3669775 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi01g0380 339 848 FH2 protein (formin) Gene Family AT5G54650 53.667 2.45e-175 528