Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi01g0372 ATGGATACTCGTTGCGAGTTATGTGCAATAATAAGAGGTGTGGTGTATTGCAAGTGTGATTCTGCGCGTCTTTGTTTGAATTGTGATGCTTATGTACACTCAGCCAACCCTTTGTCACGGAGGCATCCTCGTTCTCTGGTATGTGAGAAATGTTTCTACCAACCTGCGACTGTTCACTGCATAGATGAGAAAATGTCTGTGTGTGAAGATTGTGACTATAATCAACATGTTTGTCTAGGATTGGGACACAGGCGTCTTAAATTGCCTAGTTACACAGGTTGTCCATCTTTTTCTGACATGTGTAGGATCTGGCCTTTTGCTTTTGACCCTGGATCACCTGCTTTTGCTCATTGTTGGCCATGGGGATCATTTCATTCTTTACCCAATAGTCGAAGCCAGTGTTTGGCGCAGCTAGATGACAACGATGCATCCTTCGGTGACGGGTTAAGTGAACTTGAATCATGTACAATGTATGAGCCTAAGAAGGCTCATCATTCTTCTATCCTTCAACCAAATCCAAATTTCATGCCCAGAGATCAGCCATTTTTATTTCCTCAAGGATCTAATCTCGTGTCAGAGGGATGCCAAGATTTGAAGAATATTAGAATTTTTGAGGCTGATAAACTTTGTGACAGTCTTAACATAGAGAGTTACCAACTCAACTTTGACGATGCCAATGAAATATTTGATTCTTCTCAAGATGCTGTTGGTTACCAGCTTGAGGATGGAGGATTGGATTGTCCATTGATGGGAAAAAACATATCAGTTACAGGATCTGATACACTTATCCATAATACCATGGAGGCATCATCGTCAATCCAACAAGGTTGTGCAGCTTTTCAATCATCGAGGGAAAGTGGATCAGGATCTATGATCCACGGGATGAACACCAATGCAAATAAATGTGTTCTCATGGATGCTAGCTGCAACATAAAAATGAATATGGGATATCCTCATGATCAAGTTCATTCTAGCATTCCACTTCCACTACCCACAATTAATTGTGATAGTGACACTATCATTACGGAAATTCAGGATTGTGCCACTCCTGACTGTATGTTACAACCAACAATGTTGACAGTTGATACGTTATGGGAATCAAATTTGAAGTCTAAATGTCCTGAAGCAAGGAAGAAAGCTAAATTGAGGTACATTGAGAAAAAGAAGACCCGAACGTTTATCAAACAAATAAGATACGTGTCTCGCAAAGCAAGAGCTGATACTAGAAAACGTGTAAAAGGTAGATTTGTGAGAGTAGAAGAAGAATACGATTATGATCCTCCTGTGACAGAGAACCATTAA 1302 0.4025 MDTRCELCAIIRGVVYCKCDSARLCLNCDAYVHSANPLSRRHPRSLVCEKCFYQPATVHCIDEKMSVCEDCDYNQHVCLGLGHRRLKLPSYTGCPSFSDMCRIWPFAFDPGSPAFAHCWPWGSFHSLPNSRSQCLAQLDDNDASFGDGLSELESCTMYEPKKAHHSSILQPNPNFMPRDQPFLFPQGSNLVSEGCQDLKNIRIFEADKLCDSLNIESYQLNFDDANEIFDSSQDAVGYQLEDGGLDCPLMGKNISVTGSDTLIHNTMEASSSIQQGCAAFQSSRESGSGSMIHGMNTNANKCVLMDASCNIKMNMGYPHDQVHSSIPLPLPTINCDSDTIITEIQDCATPDCMLQPTMLTVDTLWESNLKSKCPEARKKAKLRYIEKKKTRTFIKQIRYVSRKARADTRKRVKGRFVRVEEEYDYDPPVTENH 433
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi01g0372 433 CDD Bbox1_BBX-like 5 47 - -
Mibi01g0372 433 ProSiteProfiles CCT domain profile. 377 419 IPR010402 GO:0005515
Mibi01g0372 433 SMART bboxneu5 48 88 IPR000315 GO:0008270
Mibi01g0372 433 SMART bboxneu5 1 47 IPR000315 GO:0008270
Mibi01g0372 433 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 10 4 422 - -
Mibi01g0372 433 Pfam CCT motif 377 419 IPR010402 GO:0005515
Mibi01g0372 433 ProSiteProfiles Zinc finger B-box type profile. 43 88 IPR000315 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi01g0372 Mibi-ChrMibi01 3624805 3626708 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi01g0372 1 432 C2C2-CO-like Transcription Factor Family AT3G21880 35.308 8.14e-72 229
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Mibi01g0372 CCT 5.1e-14 CL0281
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi01g0372 01 3624805 3626708 Mibi01g0372 01 3624805 3626708 ECH