Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi01g0361 ATGACGACGTCGGTGATGGGAAAGAATGGCAACGTTGGTGGGTTTGGATCCTCATCATCTTCAGCTCTCACTCTCGCCCAGGTCGAAATAATGATGTTCCAGCAAAACATGATGGAGGCACTGGACATGGCCCCCAACACCTCAGAGAGCGACATCCCTCGCCTCCGAGAAGATGACTTGGACAGCGCCACAAAGTCCGGCAGCGAAAACCTTGAAGCCCCCTCCGGCGACGACCTTGATCCCCGCCCCAACAAGAAGAAGAAGCGCTACCACCGCCATACCCAGCACCAGATCCAGGAAATGGAAGCATTCTTTAAGGAGTGCCCGCATCCAGATGACAAGCAGAGAAAGGAACTGAGCCGGGAATTAGGGTTAGAGCCATTGCAGGTCAAGTTTTGGTTTCAAAACAAGCGTACTCAGATGAAGACCCAACACGAGCGGCAAGAGAACTCACAACTCAGAGCTGAAAATGATAAGCTTCGAGCTGACAACATGAGGTATAGGGAAGCCCTTAGCAATGCCTCCTGCCCAAATTGCGGTGGACCAACCGCCATAGGTGAAATGTCTTTTGATGAGCATCACTTGAGAGTGGAAAATGCTCGCCTCAGAGAAGAGATTGATAGGATATCAGCAATAGCTGCAAAGTACGTGGGGAAGCCAGTGGTGAACTATCCACTGCTTTCCCCAACAAGTATGAATCCTGCGAGGCCACTGGAGCTTGGTGTGGGTGGTTTTGGTGGTGACGTGTATGGAGGAGGAGGAGAACTTGTTCGGTCAATGAGTGGGCCCAGCGAGGCCGATAAGCCGATGATAATAGAGCTGGCTGTGGCTGCCATGGAAGAGCTGGTGAGGATGGCACAGATGGGTGAGCCCTTATGGATGACCTCTCTTGATGGAGCAACCACTGTGCTTAACGAAGATGAATATGTCACAAGTTTCCCTCGTGGCATTGGTCCCAAACCTGCCGGATTCAAGTGTGAAGCTTCACGAGAAACTGCCGTTGTTATCATGAACCATAGTAGCCTTGTTGAGATTCTCATGGATGTGAATCAGTGGTCGACTGTTTTTTCGGGTATGGTCTCAAGAGCGATGACTCTGGAAGTATTATCAACAGGGGTGGCTGGAAACTACAATGGAGCCTTGCAAGTGATGACGGCAGAGCTACAAGTACCTACACCTTTAGTGCCAACTCGAGAGAGTTATTTTGTAAGATATTGCAAACAGCACGGGGAAGGGATATGGGCAGTGGTGGATGTTTCGTTGGACAATTTGCGCCCTAGCCCTTCTGTCAGATGTAGAAGAAGGCCTTCCGGCTGCTTAATTCATGAAATGCCTAATGGCTACTCAAAGGTGACGTGGGTGGAGCATGTAGAGGTGGACGATAGAGGAGTGCATGATCTATACAAGCAGCTGGTGAGCTGTGGACATGCTTTCGGGGCAAAACGTTGGGTGGCTACCTTGGATAGGCAGTGTGAAAGGCTTGCTAGTTCCATGGCTACCAATATTCCTGCCGGTGATGTTGGAGTGATAACGAATCAAGAAGGGAGGAAGAGTATGCTGAAACTGGCGGAGAGAATGGTGATGAGTTTTTGTGCAGGAGTGAGTGCTTCCACAGCTCACACGTGGACAACACTCTCTGGGACAGGGGCTGATGACGTCAGGGTCATGACTCGTAAGAGTGTGGATGACCCGGGAAGGCCTCCCGGCATTGTTCTCAGTGCCGCCACTTCTTTTTGGCTTCCTGTTCCTAATAATCGAGTCTTTGATTTCCTCCGTGACGAGAACTCCAGAAATGAGTGGGATATTCTTTCGAATGGTGGATTAGTCCACGAAATGGCACATATAGCTAACGGCCAGGACACAGGGAATTGTGTGTCTCTACTTCGGGTCAATAGTGCGAATTCAAGCCAGAGCAACATGTTAATACTGCAAGAAAGCTGCAGAGACACAACGGGGTCGTTTATAGTATATGCACCGGTGGATATAGCTGCAATGAACTTGGTTCTAAATGGAGGGGACCCTGATTACGTGGCCCTTCTTCCTTCTGGATTTGCCATACTCCCAGATGGAACCGCGGGACATGGTGGTGGATCTCTCTTGACTGTTGCCTTCCAAATATTGGTTGACTCAGTCCCCACTGCCAAACTCTCTCTCGGATCTGTTGCCACTGTCAATAATCTTATTGCCTGCACTGTTGACAGAATCAAGGCTTCTTTATCCTCTGAACCTGCCTAA 2235 0.4989 MTTSVMGKNGNVGGFGSSSSSALTLAQVEIMMFQQNMMEALDMAPNTSESDIPRLREDDLDSATKSGSENLEAPSGDDLDPRPNKKKKRYHRHTQHQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMKTQHERQENSQLRAENDKLRADNMRYREALSNASCPNCGGPTAIGEMSFDEHHLRVENARLREEIDRISAIAAKYVGKPVVNYPLLSPTSMNPARPLELGVGGFGGDVYGGGGELVRSMSGPSEADKPMIIELAVAAMEELVRMAQMGEPLWMTSLDGATTVLNEDEYVTSFPRGIGPKPAGFKCEASRETAVVIMNHSSLVEILMDVNQWSTVFSGMVSRAMTLEVLSTGVAGNYNGALQVMTAELQVPTPLVPTRESYFVRYCKQHGEGIWAVVDVSLDNLRPSPSVRCRRRPSGCLIHEMPNGYSKVTWVEHVEVDDRGVHDLYKQLVSCGHAFGAKRWVATLDRQCERLASSMATNIPAGDVGVITNQEGRKSMLKLAERMVMSFCAGVSASTAHTWTTLSGTGADDVRVMTRKSVDDPGRPPGIVLSAATSFWLPVPNNRVFDFLRDENSRNEWDILSNGGLVHEMAHIANGQDTGNCVSLLRVNSANSSQSNMLILQESCRDTTGSFIVYAPVDIAAMNLVLNGGDPDYVALLPSGFAILPDGTAGHGGGSLLTVAFQILVDSVPTAKLSLGSVATVNNLIACTVDRIKASLSSEPA 744
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi01g0361 744 MobiDBLite consensus disorder prediction 60 96 - -
Mibi01g0361 744 CDD homeodomain 87 145 IPR001356 GO:0003677
Mibi01g0361 744 SMART START_1 273 493 IPR002913 GO:0008289
Mibi01g0361 744 Pfam Homeodomain 87 142 IPR001356 GO:0003677
Mibi01g0361 744 ProSiteProfiles 'Homeobox' domain profile. 84 144 IPR001356 GO:0003677
Mibi01g0361 744 FunFam Homeobox-leucine zipper protein HDG1 75 160 - -
Mibi01g0361 744 SUPERFAMILY Bet v1-like 266 495 - -
Mibi01g0361 744 Gene3D - 307 477 IPR023393 -
Mibi01g0361 744 ProSiteProfiles START domain profile. 264 496 IPR002913 GO:0008289
Mibi01g0361 744 CDD START_ArGLABRA2_like 268 492 - -
Mibi01g0361 744 ProSitePatterns 'Homeobox' domain signature. 119 142 IPR017970 GO:0000981|GO:0006355
Mibi01g0361 744 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN MERISTEM L1 85 739 IPR042160 -
Mibi01g0361 744 Coils Coil 143 170 - -
Mibi01g0361 744 SUPERFAMILY Homeodomain-like 74 144 IPR009057 -
Mibi01g0361 744 SUPERFAMILY Bet v1-like 512 736 - -
Mibi01g0361 744 FunFam Homeobox-leucine zipper protein GLABRA 2 273 492 - -
Mibi01g0361 744 Gene3D - 76 161 - -
Mibi01g0361 744 SMART HOX_1 85 148 IPR001356 GO:0003677
Mibi01g0361 744 Pfam START domain 274 493 IPR002913 GO:0008289
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi01g0361 Mibi-ChrMibi01 3493615 3497961 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi01g0361 55 744 Homeobox Transcription Factor Family AT1G05230 79.914 0.0 1138
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Mibi01g0361 START 1.5e-58 CL0209
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi01g0361 01 3493615 3497961 Mibi07g0571 07 6981390 6986974 CCT
Mibi01g0361 01 3493615 3497961 Mibi01g0361 01 3493615 3497961 ECH