Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi01g0358 ATGGCCTTCTTTATTACAAGGCAGGGCCAAATGGCTGTGCCTCCAACGTTATTCCTCCTGGTTTTCTGCTTATGGATTCCCACAGGAGCTGTGGGCAGGACAGGAAATAGTACAATGATAAATAATACTGTCGCTTCAAGACCCAATGTTGTGAGAATTGGAGTCATGTTTACATTTAATTCGGTCATTGGAAGATCTGCTCAACCTGCAATTTTGGCTGCTGTTGATGATGTTAATTCTGATACAAGCATTCTCAGCAGGATAAAGCTGGAAATGATTTTGCATGATACCAACTGCAGCGGATTTCTAGGAACGGTAGAAGCTTTGCAGCTAATGGAGAAAGATGTGGTTGCCGTGATTGGTCCACAGTCGTCTGGGATAGCTCATGTGATCTCTCATGTTGTTAATGAACTTCATGTACCTCTACTGTCATTTGGGGCAACAGATCCTACCCTCTCTTCTCTGCAGTACCCATATTTCATCCGCACCACGCAAAATGATCATTTCCAGATGTATGCAATTGCAGAGTTGATTCAATATTATGGATGGAGTGAGGTAATAGCTATTTTTGTGGATGATGATAATGGAAGAAATGGAATTTCTGTACTGGGAGATGCGCTTGCACAGAGACGCGCCAAGATCTCCTACAAGGCCGCTTTCCCTCCAGATGCTTCCAGAACTGCTATAAATGGCCTGTTAAATGGAGTGAATTTATTGGAATCACGGGTCTATGTTCTGCATGTGAATCCTGATTCAGGTTTGGCAATTTTTTCTCTTGCCAAAAAGCTTGGGATGATGGGCAATGGCTATGTTTGGATTGCAACTGATTGGCTTCCTTCAGTGCTTGATTCACAAGCACCAGCTAGCCTTGAAACCTTGAATCTTTTACAAGGGGTTGTTGCATTTCGTCATCACACTCCTTATACTGATAAGAAAAACAATCTTCTCTCCAAGTTGAAAAAATTGAACAACAGTAAAACTGAAGGCTTCAATTCTTATGCTTTGTATGCATATGATTCTATCATGCTAGCTGCTCGTGCTTTGCATGATTTTTTCAATGATGGTGGAACCATATGTTTCTCCAATGACCCTAACTTGCATGAGGCTAATGGGAGTATGCTGCATTTATCATCACTTCGAACTTTCAATGATGGCCCCAAGTTTCTGCAGACAATCCTGGGAATGAATTTCACGGGTGTTAGCGGGCAGATTCAGTTTGACAAGGACAAGAACTTAATTCGCCCAGCATATGATATTGTAAACATTGGTGCATCTGGACCTCGTATAATTGGTTATTGGTCTAATCACTCTGGTCTTTCAGATATAGTTCCTGAAACCTTGTACTCAAAATCACCTAATAGGTCTACTGGCAACAAACATCTGTCCAATGTGATATGGCCAGGATTGACTTCAATCACACCCAGAGGATGGGTATTCCCCAATAATGGAAGACCATTGAGAATTGCAGTGCCAAATCGAGTAAGCTTCAGGGAGTTTGTTGGCAGAGACAAGGACCCTCCTGGGGTAAAAGGTTTTTGCATTGATGTCTTTGAAGCTGCGTTAAATGTTTTGCCTTATCCTGTCCCTAGGCAATATATACTATACGGACACGGTGATAGAAACCCTAACTATGATGAGCTTGTGGATCAAGTCTCCCACAATAATTATGATGCTGTTGTAGGGGATGTTACTATAGTCACAAACAGGACACGGATTGTGGATTTTACTCAACCTTTTATGACTTCAGGGTTGGTTGTAGTTGTTCCTGTCAAAGAGGTAAAGTCAAGCCCGTGGTCTTTCCTTAAGCCATTTACTGCATCAATGTGGTTTGTCACTGGTGCCTTTTTTCTTTTTGTGGGAGCTGTTGTATGGATTCTTGAACACCGGCACAATAATGAGTTCCGAGGACGACCGAGGAAACAACTTGTGACAATCTTTTGGTTTAGCTTCTCAACAATGTTCTTCTCACATAGAGAGAACACAGTGAGTGCTCTAGGGAGATTGGTGCTAATCATTTGGCTATTTGTGGTGCTAATTATCAATTCAAGCTACACAGCTAGCTTGACGTCCATCCTCACAGTGCAGCAACTGTCATCACAAATTGAAGGCATTGACAGTCTAATCTCAAGCACTCAACCAATCGGAGTTCAAGATGGGTCATTCGCGCGAAAGTATCTCATAGATGAGCTGAACATAGCTGAATCAAGACTGGTGATATTGAAAAATCTGCAGGACTATATAGATGCCCTCACGCGTGGACCCAGAAATGGAGGGGTGGTGGCCGTTGTTGACGAGCTTCCTTATATTGAGCTCCTCATGTCAAGCACCAATTGTCAGTTCAGAACCGTAGGCCAAGAATTCACCAAAAGTGGATGGGGATTTGCATTTCAGAGGGACTCTCCACTTGCGGTGGACATGTCAACGGCGATTCTGCAACTATCAGAGAATGGTAACTTGCAGAAGATCCATGACAAGTGGTTGTTGAAGGATGAATGTTCTGCAAATCAAAACGATAATGAAGATTCAGACCAGCTATCACTGAGCAGCTTCTGGGGGCTGTTCCTCATAAGTGGGGTGGCATGTCTGCTTGCTTTGATTGCCTTCTGCATAAAAGTGTGTTGCCAGTTCTCAAAATTCGCACCGGCCATTGATGAAGAAGATAACCACCATGAAATACAGCCACCGCGCATGCCCAAGCCTAAACGCCCCTGTCGCACTCCCAGTTTCAAGGACTTGATCGAGTTTGCTGATAAAAGAGAAGCGGAAATCAAAGAGCATATGAGAAAAAAGAGTCATAAACGTGCACGCTCCCGAAGCTTTGACCTCTAA 2829 0.432 MAFFITRQGQMAVPPTLFLLVFCLWIPTGAVGRTGNSTMINNTVASRPNVVRIGVMFTFNSVIGRSAQPAILAAVDDVNSDTSILSRIKLEMILHDTNCSGFLGTVEALQLMEKDVVAVIGPQSSGIAHVISHVVNELHVPLLSFGATDPTLSSLQYPYFIRTTQNDHFQMYAIAELIQYYGWSEVIAIFVDDDNGRNGISVLGDALAQRRAKISYKAAFPPDASRTAINGLLNGVNLLESRVYVLHVNPDSGLAIFSLAKKLGMMGNGYVWIATDWLPSVLDSQAPASLETLNLLQGVVAFRHHTPYTDKKNNLLSKLKKLNNSKTEGFNSYALYAYDSIMLAARALHDFFNDGGTICFSNDPNLHEANGSMLHLSSLRTFNDGPKFLQTILGMNFTGVSGQIQFDKDKNLIRPAYDIVNIGASGPRIIGYWSNHSGLSDIVPETLYSKSPNRSTGNKHLSNVIWPGLTSITPRGWVFPNNGRPLRIAVPNRVSFREFVGRDKDPPGVKGFCIDVFEAALNVLPYPVPRQYILYGHGDRNPNYDELVDQVSHNNYDAVVGDVTIVTNRTRIVDFTQPFMTSGLVVVVPVKEVKSSPWSFLKPFTASMWFVTGAFFLFVGAVVWILEHRHNNEFRGRPRKQLVTIFWFSFSTMFFSHRENTVSALGRLVLIIWLFVVLIINSSYTASLTSILTVQQLSSQIEGIDSLISSTQPIGVQDGSFARKYLIDELNIAESRLVILKNLQDYIDALTRGPRNGGVVAVVDELPYIELLMSSTNCQFRTVGQEFTKSGWGFAFQRDSPLAVDMSTAILQLSENGNLQKIHDKWLLKDECSANQNDNEDSDQLSLSSFWGLFLISGVACLLALIAFCIKVCCQFSKFAPAIDEEDNHHEIQPPRMPKPKRPCRTPSFKDLIEFADKREAEIKEHMRKKSHKRARSRSFDL 942
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi01g0358 942 FunFam Glutamate receptor 597 727 - -
Mibi01g0358 942 FunFam Glutamate receptor 166 335 - -
Mibi01g0358 942 Gene3D - 166 439 - -
Mibi01g0358 942 MobiDBLite consensus disorder prediction 887 907 - -
Mibi01g0358 942 SUPERFAMILY Periplasmic binding protein-like I 46 477 IPR028082 -
Mibi01g0358 942 Pfam Receptor family ligand binding region 68 422 IPR001828 -
Mibi01g0358 942 CDD GluR_Plant 484 827 - -
Mibi01g0358 942 Gene3D - 70 414 - -
Mibi01g0358 942 Gene3D - 481 596 - -
Mibi01g0358 942 Pfam Ligand-gated ion channel 829 861 IPR001320 GO:0015276|GO:0016020
Mibi01g0358 942 PRINTS Metabotropic gamma-aminobutyric acid type B receptor signature 124 152 - -
Mibi01g0358 942 PRINTS Metabotropic gamma-aminobutyric acid type B receptor signature 255 278 - -
Mibi01g0358 942 PRINTS Metabotropic gamma-aminobutyric acid type B receptor signature 64 80 - -
Mibi01g0358 942 SUPERFAMILY Periplasmic binding protein-like II 463 830 - -
Mibi01g0358 942 Pfam Bacterial extracellular solute-binding proteins, family 3 506 828 IPR001638 -
Mibi01g0358 942 CDD PBP1_GABAb_receptor_plant 52 441 IPR044440 -
Mibi01g0358 942 Gene3D - 597 718 - -
Mibi01g0358 942 PIRSF IGluLR_plant 11 941 IPR017103 -
Mibi01g0358 942 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 51 900 - -
Mibi01g0358 942 FunFam Glutamate receptor 481 597 - -
Mibi01g0358 942 SMART GluR_14 487 829 IPR001320 GO:0015276|GO:0016020
Mibi01g0358 942 FunFam Glutamate receptor 723 831 - -
Mibi01g0358 942 Gene3D - 720 832 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi01g0358 Mibi-ChrMibi01 3483120 3486873 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi01g0358 47 794 Ion Channels AT1G05200 67.513 0.0 1086
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi01g0358 01 3483120 3486873 Mibi07g0568 07 6960655 6964973 CCT
Mibi01g0358 01 3483120 3486873 Mibi01g0358 01 3483120 3486873 ECH