Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi01g0357 ATGAAACACTTTATGGGTATGCCTCGAATAGTTTGGATTTGGGTAATCCTATGTGGTCTGGCTCGTAGCCAGAGGCCAGCGTCTGTGAATATTGGTGCCGTTTTCACATTTGACTCCGTCATAGGTAGAGCTGCAAAGGTGGCGATGAAAATGGCCGTCGATGATGTCAATGCAGACCCCTTAGTTCTTAATGGCACCAAACTGAACTTGATAATGGAGGACGCCGGTTGTAACGTCTTCTTGGGATCCATTGGAGCTTTTCGTGCACTTGAGCAAGGGATTGCGGCCATAATTGGTCCACAATCATCTTCTATCTGCCGCGCCATCTCTCAAGTTACTAATGGTCTCCAAGTGCCTCAAGTTTCCTATGCTGCCACTGATCCAACACTGACGTCCCTCCAATTTCCTTTCTTTTTTCGTTCTATACCAAGTGATTCTGAGCAAATGACTGCAATGGCTGATTTAATTGGCTTCCATAATTGGAAAGAGGTCATTGCCATCTTCTTGGATGATGATTATGGGAGAAATGGAATATCTTCCCTGGTTGATGAACTTGACAAACGGAGGATAAGGATTTCTCATAAGTTGCCTATTAGCGTTAAGTTTGATCCGAATGAAATCACTAACTTGCTCAATCACTCCAAAGTGTTTGGTCCTCGTGTGTATGTAGTTCACGTCAGCCCAGATCCTAGATTAAGAATTTTTAACATAGCCCACAAACTGAAAATGATGTCTAGTGACTTTGTCTGGCTTGCCACTGATTGGCTCTCTGCTACTCTTGAATCTCTCCCCCCACAGAATCAGACCTCTCTCAGTGTTGTGCAAGGGGTGGTTGGACTTCGCCCACACATTCCAGATTCTTACCAGAAAAGATCGTTCATTTCTCAGTGGATGAAAATGCAGAATAAAAGCGCAGCTAGCTCTGGGTTAAACCATTATGGATTTTATGCATACGATACAATTTGGACTGTTGCGCATTCAATTGACAAGTTTATTGAAATACACAAGAATGTTACATTCTCAGTCAATAATAACTCGAGGCAGTTGAAAACAGGAGCAGCTGATATACGGCTTGACAAGCTTAAAATCTTCACAGGTGGATCTGATCTGATCAACATATTATTGCAATTAAATTACACTGGTGTGAGTGGTCATCTTCATTTTAGTCCAGATAGGAATATTGTTAGTAGTGGTTATGAAGTTATCAACATCAATCAGATGAAGATTACCAGGGTTGGATATTGGTCTAATGATTTTGGATTTTCAGTGGTACCGCCTGAAACTCTTAAGAAGAAAGGACATGATAGGGTTCCCCAAGATCAGAAACTTAACATGATCACTTGGCCTGGTGGAATGACAGGAAGGCCACGTGGCTGGGTGATTGCTGATCATGCAAGACCACTGAGAATTGGAGTTCCCAAGAGAGCGAGTTTTGTTGAGTTCGTCACTGTGCTTCCTGGAAGTCATCAAATTCAAGGGTACTGCATTGATATTTTCAAGAAAGCACTGGAGTTTGTACCATATGATGTTCCTTATGTGTTTCAGCCTTTCGGGAATGGTCAATCAAATCCCAATTATGATGCCCTTGTGAATATGGTTGCTAAAAATGCATTTGATGCAGTTGTTGGAGACATAGCAATTGTGACAAACCGTACAAAGACTGTGGATTTTTCTCAGCCTTTCACATCAAGTGGTCTTGTAATAGTGGCTCCGATCAAGACTTCAAAATCAAGTGCTTGGGTATTTCTCAAACCATTTAAAGCAGATATGTGGTGTGTCACTGCAGCTTCATTTATACTGATTGGAGTCGTTATATGGATTCTTGAGCACCGAATCAACAATGATTTCCGCGGTCCTCCTAAGAGGCAAATTGTGACGATGTGTATGTTCAGCCTCTCAACCCTTTTTAAGACGAATCAGGAAAATACAATAAGCTCGCTCAGTAGAATGGTGATGATAGTATGGCTTTTTCTGTTGATGGTGATCACGGCTAGCTATACAGCAAGCTTGACTTCAATTCTTACAGTGGAGCAACTTTCATCACCCATCACCGGCATAGATAGCTTGATTGCAAGTAACTGGAGAATAGGGTACCAAGTAGGGTCATTTGCTTTCAACTATCTGACAGAGAATCTTTATGTGCCAAGATCAAGACTTGTCGCTCTCGGTAACCCTGAGGAATATGCGAGGGCTCTGCATCTGGGGCCTTCCCGTGGAGGGGTGGCAGCCATAATTGATGAGCTTCCATACATAGAGTTATTTCTGTCAAAACAAACTGATTTTGGCATAATTGGGCAACCATTTACCAAAAGCAGTTGGGGATTTGCATTTCAAAGAGAGTCTCCTCTGGCTTTTGACATGTCTACGGCAATTTTGAAGCTGAATGAGAATGGAGAGCTTCAGAAGATAAGAGAGAGGTGGTTCTGTAAGAAGGGTTGTCCTGAAGAAAGGAGAAGCAAGTCGGAGCCTAACCAACTTCACATGATCAGCTTCTGGGGTCTATACCTCTCTTGTGGTGTTGTCACTCTCACTTCTTTGCTGGTGTATTTTCTGCGAACAATTCGCCAATACATCCGATACAAGCAAAGGCAAAAAGATATTCCTTCTGGATCCCGTGAGGCATCTTCTAGTGGTAAATGTTCCCACGTTATCTATAGCTTTTTTAATTTCATTGATGAGAAGGAAGAAGCCATCAAGAAAATATTCACTCACTGTGAGAATCCAGAACAGCAGCAGCCGACCATCTGA 2748 0.4243 MKHFMGMPRIVWIWVILCGLARSQRPASVNIGAVFTFDSVIGRAAKVAMKMAVDDVNADPLVLNGTKLNLIMEDAGCNVFLGSIGAFRALEQGIAAIIGPQSSSICRAISQVTNGLQVPQVSYAATDPTLTSLQFPFFFRSIPSDSEQMTAMADLIGFHNWKEVIAIFLDDDYGRNGISSLVDELDKRRIRISHKLPISVKFDPNEITNLLNHSKVFGPRVYVVHVSPDPRLRIFNIAHKLKMMSSDFVWLATDWLSATLESLPPQNQTSLSVVQGVVGLRPHIPDSYQKRSFISQWMKMQNKSAASSGLNHYGFYAYDTIWTVAHSIDKFIEIHKNVTFSVNNNSRQLKTGAADIRLDKLKIFTGGSDLINILLQLNYTGVSGHLHFSPDRNIVSSGYEVININQMKITRVGYWSNDFGFSVVPPETLKKKGHDRVPQDQKLNMITWPGGMTGRPRGWVIADHARPLRIGVPKRASFVEFVTVLPGSHQIQGYCIDIFKKALEFVPYDVPYVFQPFGNGQSNPNYDALVNMVAKNAFDAVVGDIAIVTNRTKTVDFSQPFTSSGLVIVAPIKTSKSSAWVFLKPFKADMWCVTAASFILIGVVIWILEHRINNDFRGPPKRQIVTMCMFSLSTLFKTNQENTISSLSRMVMIVWLFLLMVITASYTASLTSILTVEQLSSPITGIDSLIASNWRIGYQVGSFAFNYLTENLYVPRSRLVALGNPEEYARALHLGPSRGGVAAIIDELPYIELFLSKQTDFGIIGQPFTKSSWGFAFQRESPLAFDMSTAILKLNENGELQKIRERWFCKKGCPEERRSKSEPNQLHMISFWGLYLSCGVVTLTSLLVYFLRTIRQYIRYKQRQKDIPSGSREASSSGKCSHVIYSFFNFIDEKEEAIKKIFTHCENPEQQQPTI 915
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi01g0357 915 Gene3D - 774 808 - -
Mibi01g0357 915 FunFam Glutamate receptor 144 302 - -
Mibi01g0357 915 Pfam Bacterial extracellular solute-binding proteins, family 3 488 808 IPR001638 -
Mibi01g0357 915 Pfam Receptor family ligand binding region 46 405 IPR001828 -
Mibi01g0357 915 Gene3D - 579 712 - -
Mibi01g0357 915 CDD GluR_Plant 466 808 - -
Mibi01g0357 915 Gene3D - 740 773 - -
Mibi01g0357 915 Pfam Ligand-gated ion channel 809 840 IPR001320 GO:0015276|GO:0016020
Mibi01g0357 915 SMART GluR_14 469 810 IPR001320 GO:0015276|GO:0016020
Mibi01g0357 915 SUPERFAMILY Periplasmic binding protein-like I 23 460 IPR028082 -
Mibi01g0357 915 FunFam Glutamate receptor 463 579 - -
Mibi01g0357 915 SUPERFAMILY Periplasmic binding protein-like II 445 810 - -
Mibi01g0357 915 PIRSF IGluLR_plant 2 914 IPR017103 -
Mibi01g0357 915 CDD PBP1_GABAb_receptor_plant 30 425 IPR044440 -
Mibi01g0357 915 PRINTS Metabotropic gamma-aminobutyric acid type B receptor signature 102 130 - -
Mibi01g0357 915 PRINTS Metabotropic gamma-aminobutyric acid type B receptor signature 317 329 - -
Mibi01g0357 915 PRINTS Metabotropic gamma-aminobutyric acid type B receptor signature 42 58 - -
Mibi01g0357 915 Gene3D - 47 396 - -
Mibi01g0357 915 FunFam Glutamate receptor 579 716 - -
Mibi01g0357 915 FunFam Glutamate receptor 705 812 - -
Mibi01g0357 915 Gene3D - 463 578 - -
Mibi01g0357 915 Gene3D - 144 420 - -
Mibi01g0357 915 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 29 869 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi01g0357 Mibi-ChrMibi01 3474283 3478713 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi01g0357 13 907 Ion Channels AT2G32400 54.616 0.0 1005
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi07g0568 07 6960655 6964973 Mibi01g0357 01 3474283 3478713 CCT
Mibi01g0357 01 3474283 3478713 Mibi01g0357 01 3474283 3478713 ECH