Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi01g0346 ATGTTTAAACCTTGTATCTTATTTATGTTTTTCTTTGAAACTTGTTTGATTTGGAATCAACTAATGATGAAGTCCATGTTTTTTCTTGCTGTATCTGATCATATGGCTGATTCTCTCTCGGAAATAATCGTTCATATCTATACTAACAAGCTTGTTCTTGATCAATCACATTCCCAGAAAAACACCATTAGAGAAGAAGATGATATGAAGAAGGGACCATGGACAAGGACAGAAGATGCGATATTGATAGAATACGTGAGGAAGCATGAGGAAGGAAACTGGAACAACGTGCAAAAGATCACTGGCCTGGCTCGTAGCGGCAAAAGTTGCAGGCTGCGATGGGCAAATCACCTTCGTCCTAACCTAAAAAAAGGCCCTTTTTCTGCAGAGGAGGAGCATATGATCATCTACATGCACTCCAAGGTCGATAGCAAATGGGCTCGCATTGCCTCTGTGTTACCTGGAAGAACGGACAATGAGATAAAGAATTTCTGGTATACAAGGAGCAAAAGATGCTTAAAATCTGGCACTCCCCTCCATTCTCCTCATTCCCTTCGTAGGCCCACCAACGTCCCTCTCTGCTATTTATCCCCTTCTTCTGCAAATTTTCCTCATATAAGCACATCTCAGATGGCTGCAAATCTGGAGGGTCTTCTATCAACACTTGGTTCTCCAAATGAACCCTCCCTCTCATCATTGCCCTCTCTGCCCAGTCTTACCAATAATATTGGTTGTCCTTTGCCTAATGACTCCATTTATACTGACATGTCTTCCACCCAAATTCCACCCCCATCTGCACCACCATCTCCTGCTTCAACCATGGCACCAATAGTACCAGACAACGTCCTGCTTCAGGATCTTCTTGCTGATGAGTCTCCTCCACTTCCTCTACCAACCCTTGGGGGTGAGGATGGAGTTGGGAAGGAGGAGGATGACTTGTCAGGCTTGCTTGACAGTTTTTCCTCTGAAATGCCAATGCTCGATGATTGGCATTTGGAACTTGGCACTCAATCACCCGCTTTGCCTCGCCCTTCTACTGCTCAGCAATTTCCTTTGGATCTTGGACATTCCTGCAACAACCTCCCTCCAGTTTTCTAA 1098 0.4454 MFKPCILFMFFFETCLIWNQLMMKSMFFLAVSDHMADSLSEIIVHIYTNKLVLDQSHSQKNTIREEDDMKKGPWTRTEDAILIEYVRKHEEGNWNNVQKITGLARSGKSCRLRWANHLRPNLKKGPFSAEEEHMIIYMHSKVDSKWARIASVLPGRTDNEIKNFWYTRSKRCLKSGTPLHSPHSLRRPTNVPLCYLSPSSANFPHISTSQMAANLEGLLSTLGSPNEPSLSSLPSLPSLTNNIGCPLPNDSIYTDMSSTQIPPPSAPPSPASTMAPIVPDNVLLQDLLADESPPLPLPTLGGEDGVGKEEDDLSGLLDSFSSEMPMLDDWHLELGTQSPALPRPSTAQQFPLDLGHSCNNLPPVF 365
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi01g0346 365 MobiDBLite consensus disorder prediction 290 309 - -
Mibi01g0346 365 FunFam MYB-related transcription factor 70 123 - -
Mibi01g0346 365 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 66 122 IPR017930 -
Mibi01g0346 365 ProSiteProfiles Myb-like domain profile. 66 118 IPR001005 -
Mibi01g0346 365 ProSiteProfiles Myb-like domain profile. 119 169 IPR001005 -
Mibi01g0346 365 SMART sant 123 171 IPR001005 -
Mibi01g0346 365 SMART sant 70 120 IPR001005 -
Mibi01g0346 365 Gene3D - 125 189 - -
Mibi01g0346 365 PANTHER TRANSCRIPTION FACTOR MYB33-RELATED 56 276 - -
Mibi01g0346 365 CDD SANT 73 118 IPR001005 -
Mibi01g0346 365 Pfam Myb-like DNA-binding domain 74 133 - -
Mibi01g0346 365 Gene3D - 70 123 - -
Mibi01g0346 365 SUPERFAMILY Homeodomain-like 68 165 IPR009057 -
Mibi01g0346 365 CDD SANT 126 167 IPR001005 -
Mibi01g0346 365 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 123 173 IPR017930 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi01g0346 Mibi-ChrMibi01 3376862 3380636 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi01g0346 69 186 MYB Transcription Factor Family AT2G32460 69.492 1.04e-52 179
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Mibi01g0346 Myb_DNA-bind_6 1.6e-16 CL0123