Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi01g0336 ATGGAGGGTCCGGGCTTGGAAGAGAATAAGAAGTCTGAAGCGCATTTGACTTCTGCTGCAGCCTTTGTGGAGGGTGGAATCCAGGATGCTTGTGATGATGCTTGTAGTATATGTCTTGAAGCATTTCATGACAGCGATCCTTCAACAGTGACAAGTTGCAAACATGAGTTTCATCTCCAATGCATTCTAGAATGGTGTCAAAGAAGCTCTCAATGCCCCATGTGTTGGCAACCCATCAGTCTCAAAGATCCAACTAGTCAGGAATTACTTGAAGCAGTGGAAAGAGAGAGAAACATTAGGTTAAATCCACCCAGAAATGCCACAATCTTTCATCATCCAGCTCTGGGGGATTTTGAGTTACAACATTTGCCAGTGGGTGCAAACGATGCTGATCTTGAAGAGCGTATCATACAGCATTTAGCTGCTGCTGCTGCAATGGGACGAGCACGCCATATTGCTAGAAGGGAAGGTCAGAGGAACAGGTCATCTGCTCAAGGTCGCCCTCAGTTTTTGGTATTTTCGACCCATCCTAATTCACCTCCCATGGCTCCTGCCTCTCCAACTCATGGAGCAAATGGTGAACCTACTTCAGCAATCTCTGTTGCTACTCTGTCTCCAACTCCTGCCACTGGGGAAGAATCATCACATTCAACTTCCGTTCCTCTGGTTCAAGCAGACCATATTCCCGCTTCAGGATCAGGATCTACTGTTATTGCTGCTGATAACCATGGATCGTCTTATAATACTAGGAGATCTCCCAGTCAGTCTTCTCCAAACCGTCAGGACAGAGCAGGGCCATCAGAATTCCAATCATTTCCAGAGTCTCTAAAGTCTAGACTAAATGCAGTTTCAACGAGATACAAAGAGTCGATATCCAGGAGCACCAGAGGTTGGAAGGAGAGGTGGTTCTCTCGCAACAGCTCTTTGTCTGATGTGGGATCTGAAGGTAGACAAGAGGTTAATGCAGGGGTCGCAACTGTGTCACGCATGATGGAACGACTAGATACTGGAGACAACAATACAAATGATAGCAATCCTGCTCAAAGTCATTTAGAAGGTGTTTCTGTTGCTGGGCCAAATGACCAAAATACTTCAGATGCTGGAGGTGAAAATCTCTCAAGAGACAATAACACAAATACATCATTTGCAGCAGGTTCTAGTTCAAATTGA 1170 0.4547 MEGPGLEENKKSEAHLTSAAAFVEGGIQDACDDACSICLEAFHDSDPSTVTSCKHEFHLQCILEWCQRSSQCPMCWQPISLKDPTSQELLEAVERERNIRLNPPRNATIFHHPALGDFELQHLPVGANDADLEERIIQHLAAAAAMGRARHIARREGQRNRSSAQGRPQFLVFSTHPNSPPMAPASPTHGANGEPTSAISVATLSPTPATGEESSHSTSVPLVQADHIPASGSGSTVIAADNHGSSYNTRRSPSQSSPNRQDRAGPSEFQSFPESLKSRLNAVSTRYKESISRSTRGWKERWFSRNSSLSDVGSEGRQEVNAGVATVSRMMERLDTGDNNTNDSNPAQSHLEGVSVAGPNDQNTSDAGGENLSRDNNTNTSFAAGSSSN 389
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi01g0336 389 MobiDBLite consensus disorder prediction 226 276 - -
Mibi01g0336 389 SUPERFAMILY RING/U-box 28 83 - -
Mibi01g0336 389 MobiDBLite consensus disorder prediction 151 198 - -
Mibi01g0336 389 MobiDBLite consensus disorder prediction 162 176 - -
Mibi01g0336 389 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 14 84 IPR013083 -
Mibi01g0336 389 MobiDBLite consensus disorder prediction 333 389 - -
Mibi01g0336 389 PANTHER ZINC FINGER, RING/FYVE/PHD-TYPE 17 84 - -
Mibi01g0336 389 ProSiteProfiles Zinc finger RING-type profile. 35 75 IPR001841 -
Mibi01g0336 389 FunFam E3 ubiquitin-protein ligase RHF2A 6 109 - -
Mibi01g0336 389 Pfam Ring finger domain 34 75 IPR001841 -
Mibi01g0336 389 SMART ring_2 35 75 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi01g0336 Mibi-ChrMibi01 3294592 3298528 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi01g0336 32 83 C3H Transcription Factor Family AT4G00335 44.231 1.15e-11 61.6