Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Mibi01g0336 | ATGGAGGGTCCGGGCTTGGAAGAGAATAAGAAGTCTGAAGCGCATTTGACTTCTGCTGCAGCCTTTGTGGAGGGTGGAATCCAGGATGCTTGTGATGATGCTTGTAGTATATGTCTTGAAGCATTTCATGACAGCGATCCTTCAACAGTGACAAGTTGCAAACATGAGTTTCATCTCCAATGCATTCTAGAATGGTGTCAAAGAAGCTCTCAATGCCCCATGTGTTGGCAACCCATCAGTCTCAAAGATCCAACTAGTCAGGAATTACTTGAAGCAGTGGAAAGAGAGAGAAACATTAGGTTAAATCCACCCAGAAATGCCACAATCTTTCATCATCCAGCTCTGGGGGATTTTGAGTTACAACATTTGCCAGTGGGTGCAAACGATGCTGATCTTGAAGAGCGTATCATACAGCATTTAGCTGCTGCTGCTGCAATGGGACGAGCACGCCATATTGCTAGAAGGGAAGGTCAGAGGAACAGGTCATCTGCTCAAGGTCGCCCTCAGTTTTTGGTATTTTCGACCCATCCTAATTCACCTCCCATGGCTCCTGCCTCTCCAACTCATGGAGCAAATGGTGAACCTACTTCAGCAATCTCTGTTGCTACTCTGTCTCCAACTCCTGCCACTGGGGAAGAATCATCACATTCAACTTCCGTTCCTCTGGTTCAAGCAGACCATATTCCCGCTTCAGGATCAGGATCTACTGTTATTGCTGCTGATAACCATGGATCGTCTTATAATACTAGGAGATCTCCCAGTCAGTCTTCTCCAAACCGTCAGGACAGAGCAGGGCCATCAGAATTCCAATCATTTCCAGAGTCTCTAAAGTCTAGACTAAATGCAGTTTCAACGAGATACAAAGAGTCGATATCCAGGAGCACCAGAGGTTGGAAGGAGAGGTGGTTCTCTCGCAACAGCTCTTTGTCTGATGTGGGATCTGAAGGTAGACAAGAGGTTAATGCAGGGGTCGCAACTGTGTCACGCATGATGGAACGACTAGATACTGGAGACAACAATACAAATGATAGCAATCCTGCTCAAAGTCATTTAGAAGGTGTTTCTGTTGCTGGGCCAAATGACCAAAATACTTCAGATGCTGGAGGTGAAAATCTCTCAAGAGACAATAACACAAATACATCATTTGCAGCAGGTTCTAGTTCAAATTGA | 1170 | 0.4547 | MEGPGLEENKKSEAHLTSAAAFVEGGIQDACDDACSICLEAFHDSDPSTVTSCKHEFHLQCILEWCQRSSQCPMCWQPISLKDPTSQELLEAVERERNIRLNPPRNATIFHHPALGDFELQHLPVGANDADLEERIIQHLAAAAAMGRARHIARREGQRNRSSAQGRPQFLVFSTHPNSPPMAPASPTHGANGEPTSAISVATLSPTPATGEESSHSTSVPLVQADHIPASGSGSTVIAADNHGSSYNTRRSPSQSSPNRQDRAGPSEFQSFPESLKSRLNAVSTRYKESISRSTRGWKERWFSRNSSLSDVGSEGRQEVNAGVATVSRMMERLDTGDNNTNDSNPAQSHLEGVSVAGPNDQNTSDAGGENLSRDNNTNTSFAAGSSSN | 389 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Mibi01g0336 | 389 | MobiDBLite | consensus disorder prediction | 226 | 276 | - | - | |
Mibi01g0336 | 389 | SUPERFAMILY | RING/U-box | 28 | 83 | - | - | |
Mibi01g0336 | 389 | MobiDBLite | consensus disorder prediction | 151 | 198 | - | - | |
Mibi01g0336 | 389 | MobiDBLite | consensus disorder prediction | 162 | 176 | - | - | |
Mibi01g0336 | 389 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 14 | 84 | IPR013083 | - | |
Mibi01g0336 | 389 | MobiDBLite | consensus disorder prediction | 333 | 389 | - | - | |
Mibi01g0336 | 389 | PANTHER | ZINC FINGER, RING/FYVE/PHD-TYPE | 17 | 84 | - | - | |
Mibi01g0336 | 389 | ProSiteProfiles | Zinc finger RING-type profile. | 35 | 75 | IPR001841 | - | |
Mibi01g0336 | 389 | FunFam | E3 ubiquitin-protein ligase RHF2A | 6 | 109 | - | - | |
Mibi01g0336 | 389 | Pfam | Ring finger domain | 34 | 75 | IPR001841 | - | |
Mibi01g0336 | 389 | SMART | ring_2 | 35 | 75 | IPR001841 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Mibi01g0336 | Mibi-ChrMibi01 | 3294592 | 3298528 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Mibi01g0336 | 32 | 83 | C3H Transcription Factor Family | AT4G00335 | 44.231 | 1.15e-11 | 61.6 |