Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi01g0334 ATGGATATGATGGCAACCGAACGTGTTTGTTATGTTCACTGCAACTTCTGCAACACCATCCTAGCGGTAAGTGTTCCATGCAGCAGTTTCCTGACCATTGTGACGGTTCGATGTGGTCATTGTGCTAATTTACTGTCAGTCAACGTCGGAGCATCTCTCCAAACATTCCCTCCTCAAGACCTTCAGAAACAGCACCTAACCCTTGAAGAATCAAGCAACAGAGAAGCTGGATCATCTTCAAAATGCAGTAAATTTGCTGCCTTTGAGTCTGCAGAGCATGACCAACACAGGATTCCTCCCATTCGTCCCCCTGAGAAGAGACAACGAGTTCCTTCTGCTTATAACAAGTTCATCAAGGAGGAGATCCAAAGGATTAAGGCTAGTAATCCAGATATCAGCCACAGGGAGGCGTTTAGCACAGCGGCCAAAAACTGGGCACATTTTCCTCATATTCACTTTGGATTGAAACTGGACGGCAACAAGCAAGGAAAGTTGGACCAGGAAGAGGGAGCTCAAAAATCTAATGATGGCCTTTATTGA 540 0.4556 MDMMATERVCYVHCNFCNTILAVSVPCSSFLTIVTVRCGHCANLLSVNVGASLQTFPPQDLQKQHLTLEESSNREAGSSSKCSKFAAFESAEHDQHRIPPIRPPEKRQRVPSAYNKFIKEEIQRIKASNPDISHREAFSTAAKNWAHFPHIHFGLKLDGNKQGKLDQEEGAQKSNDGLY 179
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi01g0334 179 Gene3D High mobility group box domain 100 172 IPR036910 -
Mibi01g0334 179 Pfam YABBY protein 5 155 IPR006780 GO:0007275
Mibi01g0334 179 PANTHER PROTEIN YABBY 6-RELATED 5 165 IPR006780 GO:0007275
Mibi01g0334 179 SUPERFAMILY HMG-box 99 148 IPR036910 -
Mibi01g0334 179 MobiDBLite consensus disorder prediction 90 104 - -
Mibi01g0334 179 MobiDBLite consensus disorder prediction 158 179 - -
Mibi01g0334 179 MobiDBLite consensus disorder prediction 90 110 - -
Mibi01g0334 179 FunFam Axial regulator YABBY 100 171 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi01g0334 Mibi-ChrMibi01 3263388 3269028 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi01g0334 4 179 C2C2-YABBY Transcription Factor Family AT1G08465 66.667 4.10e-79 231
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-YABBY Mibi01g0334 YABBY 4.3e-71 CL0114