Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi01g0332 ATGGATCCCTTGATTCCCAAGCTGCGCCGCCGCCTTCTTGCATGGCTTCACCGATCTCGCTCTGATCAAATATACTTTATGAGGCGACTTTCATACAAGGATGTTAAGAGAGCAACGGATGGTTTTCACAGAATTATATACAGCAACTCTCAAATTGCAGCATATGCGGCCAAATTTGGAGATGGCAGCGTTTCTTTGGTGAAAGAAATAAAGGATTTTGATCAAGCAGACGACAGTTTCTACAGTGAAGTGCAATTCTTGGGCAGCTTGCATCACCGACACCTTTTGTCACTCGAAGGATTTTCCTTGAAACATAAGAGGTTGCTCATTTTTGGCAGCATAGAGAATGGAAGCTTAAGGGATCATCTAAATGATCCCCTGAAGACACCCTTAAATTGGAGGACAAGGTTACAGATAGCTATTGGTGTTGTGGCTGCCCTGGAATACTTGTTTCTCTTTGTTGAACAACCTTTATGTCATGTCTCCATCAGCTCAAGCAATATCATGTTAGATGATAATTTTACAGCTAAACTATCTGATTTTGGCCTTCTTTCTTGTGTTGGAAATCCCGTTATGATGCCAAATTTAAAAGATGACAGTATGAGGCAGAAAAGTGGTAACATAATATTCCAATTGGGAGTATTCATACTGGAACTTGTCACTGGTCAGTCTTCAGAGATGGAAGGTTCTGATCTAATAGAATGGATCCAGGAATCACGCTTCTACAGCTCCATTCATAACATGGTAGACCCTGATCTTGGCAACAATTACGACTCTAGGGAGTTAAAAACCCTTCTAGCTGTTGCAAAGTTATGCATCAGATCAAGGGACAAGCCTGTATGTACAATCCCCCAGTTATTTCGATATCTTCAACAGAAGGTTGATATACCTCATGACTAA 900 0.4111 MDPLIPKLRRRLLAWLHRSRSDQIYFMRRLSYKDVKRATDGFHRIIYSNSQIAAYAAKFGDGSVSLVKEIKDFDQADDSFYSEVQFLGSLHHRHLLSLEGFSLKHKRLLIFGSIENGSLRDHLNDPLKTPLNWRTRLQIAIGVVAALEYLFLFVEQPLCHVSISSSNIMLDDNFTAKLSDFGLLSCVGNPVMMPNLKDDSMRQKSGNIIFQLGVFILELVTGQSSEMEGSDLIEWIQESRFYSSIHNMVDPDLGNNYDSRELKTLLAVAKLCIRSRDKPVCTIPQLFRYLQQKVDIPHD 299
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi01g0332 299 FunFam Protein kinase superfamily protein 16 112 - -
Mibi01g0332 299 Pfam Protein tyrosine and serine/threonine kinase 66 187 IPR001245 GO:0004672|GO:0006468
Mibi01g0332 299 Gene3D Phosphorylase Kinase; domain 1 13 112 - -
Mibi01g0332 299 ProSiteProfiles Protein kinase domain profile. 32 299 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi01g0332 299 SMART tyrkin_6 24 266 IPR020635 GO:0004713|GO:0006468
Mibi01g0332 299 FunFam probable receptor-like protein kinase At1g49730 209 298 - -
Mibi01g0332 299 SUPERFAMILY Protein kinase-like (PK-like) 24 267 IPR011009 -
Mibi01g0332 299 PANTHER OS01G0253100 PROTEIN 25 294 IPR045271 -
Mibi01g0332 299 Gene3D Transferase(Phosphotransferase) domain 1 114 296 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi01g0332 Mibi-ChrMibi01 3251099 3253600 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi01g0332 6 298 Receptor kinase-like Gene Family AT3G19300 35.238 1.02e-55 189
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_URK-1 Mibi01g0332 PK_Tyr_Ser-Thr 2.1e-16 CL0016