Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi01g0322 ATGGCAGAAATAGAGGTTCCTCAATATTTCGTGTGCCCAATTTCTCTAGAGATAATGAAAGATCCAGTGACGACCGTTACAGGTATAACCTACGACAGAGAAAGCATAGAGCAGTGGTTGCTCACGTCGAAGGAGAGGAAATGCCCTGTCACCAAGCAGCCATTGCCTCCTCTCTCTTCCTTGACCCCTAATTCCACCTTACTCAGGCTTATCCAGGCTTGGTCCTCACAAAACGACGTCGTTCGGCTCCCTTCCCCTAAACCCCTCCTCACCTCCATCCACGTCCACAAGCTTATTTCTGATCTTCACATTCCTCATCTTTATCAAACAACATTGAACAAAATGGATGCTTTGGCCTCACACAGCGAAATCAACAGAAGGTGCATGGTGGAATCTGGGGTGCTCCAGGCTATGGTTTCCATAATTACTCGCAGTTTCAATGAAGGTATAACGTTTTGCCTTGAAGAAGCTTTGAGAACTTTTCGTTTACTCTGTGCTTCCTCCTCATCCATGCCTCACACGAAGCCTCTGTTTTGTGATAACTTAGACTCTATCATAACCTCTTTGACCTGGGCTTTGCAAATTGACTTCAGCAACAGAATTAATATATTAAACGAAGCAATGCCTATCTTGAAATCCACCATTGAAGCCGCAGATTCAAGCCTTCTGGGAAACTTAAAGGTTGAATTTTTCAGAGAAATTACAAGGGTGCTGGAAAACAGAGGAGTGTCAGAGCAGGCCATCAAATCAGCCTTGGAGGTGCTCATAGAAACGTGCCCATTAGGAAGAAACAGAATGAAAATCGCAGAATCAGGAGCAGTGTCTGAATTAATTGATCTTGAGCTGGAAAAACCAACGAAGAAGATAACAGAGTTGGTGTTCAATCTTCTGGCGCATCTATGTTCGTGTGCTGATGGGAGAGAACAGTTTCTGCAACACGCAGGGGGGATTGCTGTGATATCAAAGAGAATTCTGAGGGTTTCAAATGCAACAGATGATAGAGCTGTTCATATATTATCGTTAATAGCTAGGCACTCTTCTTCGAATGATGTCGTTTTGGAGATGTTGAGGGTGGGGGCTGTGTCCAAGCTCTGCATGGTGATGCAGGCTGATTGTGCTTCGTATTTGAAGGAGAAAGCTAGAAATATCCTTAGGTTACACTCCAATACTTGGAATAATTCTCCTTGCATTCAAGTTTATTTGCTAACCAGGCACCAAAGGTGA 1224 0.4395 MAEIEVPQYFVCPISLEIMKDPVTTVTGITYDRESIEQWLLTSKERKCPVTKQPLPPLSSLTPNSTLLRLIQAWSSQNDVVRLPSPKPLLTSIHVHKLISDLHIPHLYQTTLNKMDALASHSEINRRCMVESGVLQAMVSIITRSFNEGITFCLEEALRTFRLLCASSSSMPHTKPLFCDNLDSIITSLTWALQIDFSNRINILNEAMPILKSTIEAADSSLLGNLKVEFFREITRVLENRGVSEQAIKSALEVLIETCPLGRNRMKIAESGAVSELIDLELEKPTKKITELVFNLLAHLCSCADGREQFLQHAGGIAVISKRILRVSNATDDRAVHILSLIARHSSSNDVVLEMLRVGAVSKLCMVMQADCASYLKEKARNILRLHSNTWNNSPCIQVYLLTRHQR 407
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi01g0322 407 SMART Ubox_2 9 74 IPR003613 GO:0004842|GO:0016567
Mibi01g0322 407 Gene3D - 106 395 IPR011989 -
Mibi01g0322 407 CDD RING-Ubox_PUB 10 53 IPR045210 -
Mibi01g0322 407 SUPERFAMILY ARM repeat 69 392 IPR016024 -
Mibi01g0322 407 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 1 82 IPR013083 -
Mibi01g0322 407 PANTHER WDSAM1 PROTEIN 3 398 IPR045185 GO:0061630
Mibi01g0322 407 Pfam U-box domain 6 78 IPR003613 GO:0004842|GO:0016567
Mibi01g0322 407 ProSiteProfiles U-box domain profile. 5 81 IPR003613 GO:0004842|GO:0016567
Mibi01g0322 407 SUPERFAMILY RING/U-box 4 82 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi01g0322 Mibi-ChrMibi01 3152117 3153340 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi01g0322 3 397 U-box Gene Family AT2G35930 39.604 5.91e-91 278