Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi01g0321 ATGGAATCCCCCGGAGACGGCTTCCACACACTTTACCTTCTCAACCCCACCACCGCCACCGTTGCCTACTCCGACGCACAACCTCTCCTCCTCAATAATCCCAACTCTGCCCCCAACCTCTCCACCTTCTCCCACGCGCCGCCCCCTCCCTCCCACCACTACAACCTGTGGGGCTCAATCATTGATCCCCACCCTACCTCCGCCTCCATGGAAGTGTCTCCCCACCATATGATGAGTTTCAGGAGGCCTGCTACTTCTCATCAGCAGGGTCTCTCCCTCACCCTCTCTTCTCAACACACTCCTTTTCATACCTCTCTTTCTGCCGAATATGAACAACATCCTCAAGCTTCTCCCATACCTACCTCCACCTCCCACGATGTGCGGGTTCTGCAGGTTCCAGGTAATCATGGTTCATTGAATGGAATTTCCAGCTTCGTGTTGGGATCTAAGTACTTGAGGGCGGCTCAAGAGGTTTTGGAAGAGGCTGTTCATGTGGGTATTAAGGGATTCAACCAAGAGGGCGGGGCTATGAAACAGAAGATGAAAGCCACTGCTCAAGATTATTCAACATCTGCTGCGGATCGTGAAGACGCTTCAAGTGGTGATGCAAGTGGGAGTGGCAAGCAAGGAGGTGAACTCAGTACAGCGCAGAGACAAGAGCTTCAGATGAAGAAGTCCAAGCTCCTCACCATACTTGATGAGGTGGAACAAAGGTACAGACAGTATCACCACCAAATGCAGATAGTGATAGCATCATTCGAGCAGGCTGCGGGATATGGTGCAGCCAAAACATACACATCCCTTGCCCTTAAGACCATCTCCAAGCAATTCCGATGCCTCAAAGACGCAATCTCCTCACAAATAAGAGCCACAAGCAAGACATTGGGCGAAGACGATTGCTTGGGAGCTAAGGTAGAAGGTTCCAGGCTGAGATTTGTGGACCACCATCTTCGCCAACAAAGGGCCTTACAGCAACTGGGAATGATACAGCACAATGCTTGGAGACCCCAAAGAGGCTTGCCTGAACGAGCCGTCTCCATTCTTCGTGCTTGGCTCTTCGAGCATTTTCTTCACCCCTATCCCAAGGACTCCGACAAAGTTTTGTTGGCGAAACAAACTGGACTTACTCGTAGCCAGGTGTCAAACTGGTTCATAAATGCTCGAGTTCGGCTGTGGAAACCAATGGTGGAAGAAATGTACACTGAGGAAATGAAAGAGCAAGAGGGGAATAATAATAATAATAAGGAGGTGGGGTCAGCTGGCAGTACTAAGGATAAGTCACAGCCACAGGATCCAGGTGGTGGGCTTCGGCTTGACCGTCATCATCATCAAATGAAAGGCTTGCAATCAAACAATCCAGATCATCAAAGCTTCAATAACCAAACAAATACTCCAACCGACATCTCAAATTACCTTTCAGGATTCCCCGTTGGATCGTTGTCTCATCATCATAATCATGAAATGCAAATAAGAAGCAGCCCCAAGAAGCCAAGAAGTTCAGAAGTAATGAACAACTCTCCAAGCAGTATACTGTCGGTGGACATGGATATGAAGCCTGGTGGAGATCACACGGAGAGATCAGAAGGAAACGCAAAGTCGTTTGGCGTGGAAAGGCACAGTTTGATAAGTAGTAACGATGGGAATGACAATAACAATGGAGGAGGAGGAGGAGGAGGATTTGGAGGGTTCACCATGGAAGACATGGGAAGGTACAACGTGGCTGACCATCAATTGGCTCCAAGGTTCCATGGAAACGGCGTGTCGCTTACTCTTGGACTCCCACACACTACTGATAATAACCTTCCCCGCCATGGATTTCTGTCTCACAATATGAACTTGACTTCTGATGGAAGCGACTTTTGTGCCATGAACGCTCCTCCGCCGTCTCATTCAAACGCAAGTTATGAGAATATAGATCACATTCAGAACAGAAAGAGGTTTGCTGCTCAGTTATTGCCTGATTTTGTGGCTTGA 1974 0.4873 MESPGDGFHTLYLLNPTTATVAYSDAQPLLLNNPNSAPNLSTFSHAPPPPSHHYNLWGSIIDPHPTSASMEVSPHHMMSFRRPATSHQQGLSLTLSSQHTPFHTSLSAEYEQHPQASPIPTSTSHDVRVLQVPGNHGSLNGISSFVLGSKYLRAAQEVLEEAVHVGIKGFNQEGGAMKQKMKATAQDYSTSAADREDASSGDASGSGKQGGELSTAQRQELQMKKSKLLTILDEVEQRYRQYHHQMQIVIASFEQAAGYGAAKTYTSLALKTISKQFRCLKDAISSQIRATSKTLGEDDCLGAKVEGSRLRFVDHHLRQQRALQQLGMIQHNAWRPQRGLPERAVSILRAWLFEHFLHPYPKDSDKVLLAKQTGLTRSQVSNWFINARVRLWKPMVEEMYTEEMKEQEGNNNNNKEVGSAGSTKDKSQPQDPGGGLRLDRHHHQMKGLQSNNPDHQSFNNQTNTPTDISNYLSGFPVGSLSHHHNHEMQIRSSPKKPRSSEVMNNSPSSILSVDMDMKPGGDHTERSEGNAKSFGVERHSLISSNDGNDNNNGGGGGGGFGGFTMEDMGRYNVADHQLAPRFHGNGVSLTLGLPHTTDNNLPRHGFLSHNMNLTSDGSDFCAMNAPPPSHSNASYENIDHIQNRKRFAAQLLPDFVA 657
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi01g0321 657 PANTHER HOMEOBOX PROTEIN TRANSCRIPTION FACTORS 96 416 - -
Mibi01g0321 657 Pfam Associated with HOX 146 285 IPR006563 -
Mibi01g0321 657 MobiDBLite consensus disorder prediction 518 532 - -
Mibi01g0321 657 SMART HOX_1 334 398 IPR001356 GO:0003677
Mibi01g0321 657 Gene3D - 337 416 - -
Mibi01g0321 657 MobiDBLite consensus disorder prediction 495 512 - -
Mibi01g0321 657 FunFam BEL1-like homeodomain protein 9 337 399 - -
Mibi01g0321 657 Coils Coil 218 238 - -
Mibi01g0321 657 CDD homeodomain 334 395 IPR001356 GO:0003677
Mibi01g0321 657 MobiDBLite consensus disorder prediction 411 429 - -
Mibi01g0321 657 SUPERFAMILY Homeodomain-like 335 401 IPR009057 -
Mibi01g0321 657 Pfam Homeobox KN domain 351 390 IPR008422 GO:0003677|GO:0006355
Mibi01g0321 657 MobiDBLite consensus disorder prediction 449 476 - -
Mibi01g0321 657 MobiDBLite consensus disorder prediction 403 532 - -
Mibi01g0321 657 SMART prehox3 140 286 IPR006563 -
Mibi01g0321 657 ProSiteProfiles 'Homeobox' domain profile. 331 394 IPR001356 GO:0003677
Mibi01g0321 657 MobiDBLite consensus disorder prediction 540 559 - -
Mibi01g0321 657 MobiDBLite consensus disorder prediction 187 216 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi01g0321 Mibi-ChrMibi01 3142215 3145161 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi01g0321 49 657 Homeobox Transcription Factor Family AT2G35940 44.012 1.41e-124 383
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-BELL Mibi01g0321 POX 6.9e-47 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi01g0321 01 3142215 3145161 Mibi07g0499 07 6009470 6013671 CCT
Mibi01g0321 01 3142215 3145161 Mibi01g0321 01 3142215 3145161 ECH