Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi01g0309 ATGCAAGGAGCGGAGAGAATGGCCGATGCGGTTTCAAGAGAAGCACAGATGTCGATCGCCGCTTCCTCCATGTTTCCTGGCTTCAGATTCTGTCCTACCGATGAAGAGTTGATTTCCTATTATCTCAGGAAGAAGTTGGATGGCCATGAGGAGAGCGTTCAGGTGATTTCTGAGGTTGAGATTTGCAGATATGAGCCTTGGGATTTACCAGCCAAATCATTCATTCAATCAGATACCGAATGGTTCTTCTTCTCCCCTCGCGGAAGGAAGTACCCAAATGGTTCACAAAGTAAGAGGGCAACCGAATGTGGCTATTGGAAGGCCACCGGAAAAGAGCGCAATGTAAAGTCAGGTTCTAATGTTATAGGCACCAAGCGAACCTTGGTATTCCATATGGGTCGTGCCCCAAAAGGGGAAAGGACTGAATGGATCATGCACGAATACTGCATCAACGACAAATCCCAGGATTCGTTAGTTATTTGTCGGCTAAAGAGGAACACAGAGTTTCGTCAGAACGATGCTTCAAACAGAGCATCTTCAAGTCACCAGCAGGCAGTGAATTCTCATGAAAGCAACTGTGCTGTATCAGAAGCAGAGATAGATCAAAGGGGTTTGTCCGAACAAGACAAAGGGGTTGGATGTAGTTCAAAACGCAGTAGTTGCAGTTACGATTCTCCTTCAGTGGAGCAAATTGATTCTGCCTCTGAATCCAATCAGAGAACAGCCAACTATGATGCTGCTGTGGCAGAATCGTCGAGTCACCAAAAGGTGGTGGATGAAGAGGATTGTTATGCTGAGATACTCAAGAATGATATAATAAAATTGGATGAATCTGCACTGACGACGCAAGAGGCTCATGCAATATCGCATGATCCTCCTCAGACGCTTGCATTCCAAGGCACAGCTCAACGAAGAATTAGATTAAAGGTGAATAAACCAAGGCATTCAGCTGCTGCAGGACTTGGTTTTCCGAGCTCAAAGCGTCCATCCAAGAGTACCACTACCACCCTCTTTGGTACATTGACAAATCGAGTTCTGTTATGTGTGTTCTTCATTTTAACTTTGATAGCCCTATATTTGTCCTTAATGGGTTTGGGAAGTCTCAAATCTGTGACAGACAGTGGTAGAATTGGTTCACTTTGA 1143 0.4497 MQGAERMADAVSREAQMSIAASSMFPGFRFCPTDEELISYYLRKKLDGHEESVQVISEVEICRYEPWDLPAKSFIQSDTEWFFFSPRGRKYPNGSQSKRATECGYWKATGKERNVKSGSNVIGTKRTLVFHMGRAPKGERTEWIMHEYCINDKSQDSLVICRLKRNTEFRQNDASNRASSSHQQAVNSHESNCAVSEAEIDQRGLSEQDKGVGCSSKRSSCSYDSPSVEQIDSASESNQRTANYDAAVAESSSHQKVVDEEDCYAEILKNDIIKLDESALTTQEAHAISHDPPQTLAFQGTAQRRIRLKVNKPRHSAAAGLGFPSSKRPSKSTTTTLFGTLTNRVLLCVFFILTLIALYLSLMGLGSLKSVTDSGRIGSL 380
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi01g0309 380 Gene3D NAC domain 33 171 IPR036093 GO:0003677|GO:0006355
Mibi01g0309 380 MobiDBLite consensus disorder prediction 212 246 - -
Mibi01g0309 380 ProSiteProfiles NAC domain profile. 24 166 IPR003441 GO:0003677|GO:0006355
Mibi01g0309 380 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 23 235 - -
Mibi01g0309 380 MobiDBLite consensus disorder prediction 172 195 - -
Mibi01g0309 380 MobiDBLite consensus disorder prediction 172 246 - -
Mibi01g0309 380 SUPERFAMILY NAC domain 14 165 IPR036093 GO:0003677|GO:0006355
Mibi01g0309 380 Pfam No apical meristem (NAM) protein 26 149 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi01g0309 Mibi-ChrMibi01 2966752 2968442 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi01g0309 11 285 NAC Transcription Factor Family AT2G27300 52.899 3.84e-97 291
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Mibi01g0309 NAM 1.2e-34 No_clan