Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi01g0300 ATGGAACATCTTACTCCTCCTCCTGGTTTTCGCTTCTTCCCAACAGAGGAAGAGCTTGTTGCTTTCTACCTCCATAACAAGCTTCAAGGTCGAAGCCACCACTTCAACAGAGTCATCCCTGACATTGGCATTTATGATTTTGAACCCTCCCAGCTTCCCAAGCTTGCGGGAGAGATGTGTCGTGAGGACACAGAGCAATGGTTCTTCTTCACGCCGAGACAAGAGAGGGAAGCAAGAGGAGGAAGACCGAACAGAAGCACGGCATGTGGGTATTGGAAAGCCACAGGTTCTCCAGGTTATGTTTACTCTTCTGATAACAGAGTCATTGGTGTGAAGAAAACCATGGTTTATTACAGAGGCAAAGCTCCTTCCGGAAGAAAAACCAAGTGGAAAATGAACGAATACAGAGCTATAGAATTCTCTCACCAATCCTCCGATGCCACTCCTAAGTTGAGGCATGAATTCAGCTTGTGCCGAGTTTACGTGATATCGGGAAGCTTTCGAGCATTTGATCGCCGCCCTTTAGCTTCTTCAATCATAGATCAGAACACGATGGTGGATGAATCGAGCTCACTTGGAATCTCCCAACTTCCAGTCCCAGAAGGTGGAGGATCAAGTGGTGTAAATAACGAGGAGGAGGAGGAAGAAGAAGAACCTCTGTGGGACTGGGAACACTTTAATTGTGACTCCAATCCTTGA 699 0.4692 MEHLTPPPGFRFFPTEEELVAFYLHNKLQGRSHHFNRVIPDIGIYDFEPSQLPKLAGEMCREDTEQWFFFTPRQEREARGGRPNRSTACGYWKATGSPGYVYSSDNRVIGVKKTMVYYRGKAPSGRKTKWKMNEYRAIEFSHQSSDATPKLRHEFSLCRVYVISGSFRAFDRRPLASSIIDQNTMVDESSSLGISQLPVPEGGGSSGVNNEEEEEEEEPLWDWEHFNCDSNP 232
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi01g0300 232 ProSiteProfiles NAC domain profile. 6 163 IPR003441 GO:0003677|GO:0006355
Mibi01g0300 232 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 2 176 - -
Mibi01g0300 232 Pfam No apical meristem (NAM) protein 7 136 IPR003441 GO:0003677|GO:0006355
Mibi01g0300 232 SUPERFAMILY NAC domain 4 161 IPR036093 GO:0003677|GO:0006355
Mibi01g0300 232 MobiDBLite consensus disorder prediction 191 232 - -
Mibi01g0300 232 Gene3D NAC domain 15 166 IPR036093 GO:0003677|GO:0006355
Mibi01g0300 232 MobiDBLite consensus disorder prediction 208 222 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi01g0300 Mibi-ChrMibi01 2921028 2921934 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi01g0300 9 227 NAC Transcription Factor Family AT5G22380 56.388 2.58e-86 254
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Mibi01g0300 NAM 1.6e-30 No_clan