Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi01g0290 ATGGTTCCAAAAGCAGCAAAGCTTTTACTTGTTGGAAAATTCTGCACTCCCATAGATACACACAGCTGCAATAGGCTGGACATTAGATATGGAATAATGGGAGAGACAGAGAATGTGGTGGTGCCTGAGGTGGAGGAGCTACCCAAGGCTATTGTGCGCCGTGTGGTGAAAGACGAACTCTCACGGTGCGCCGACGGAGACATCAACATTCTCAAAGATTCCCTCCTCGCTTTCTCCGAAAGCGCCCGCATCTTCATCCACTACCTCTCCGCAACGGCCAACGACATATGCAAGGAATCAAAGAGGCAGATAATAAGCGCCAATGATGTATTTAAAGCTCTTGAAGAGACCGAGTATTCCCAGTTTATCCGACCTCTAAAAGCTTCTCTTGAAGAGTTTAAGAAAAAAAATGCCGGAAAGAGAGCAAGTGCGTCAAAGGAAAAGGATGAGAAAAAGAAAAGAAAGTTAGAAGATGAGTCATCTGATAAAGATGAGTGTGGTGACAACGAATGA 513 0.4503 MVPKAAKLLLVGKFCTPIDTHSCNRLDIRYGIMGETENVVVPEVEELPKAIVRRVVKDELSRCADGDINILKDSLLAFSESARIFIHYLSATANDICKESKRQIISANDVFKALEETEYSQFIRPLKASLEEFKKKNAGKRASASKEKDEKKKRKLEDESSDKDECGDNE 170
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi01g0290 170 Gene3D Histone, subunit A 42 170 IPR009072 GO:0046982
Mibi01g0290 170 Coils Coil 139 159 - -
Mibi01g0290 170 MobiDBLite consensus disorder prediction 136 170 - -
Mibi01g0290 170 PANTHER DNA POLYMERASE EPSILON SUBUNIT 3 42 165 - -
Mibi01g0290 170 MobiDBLite consensus disorder prediction 136 162 - -
Mibi01g0290 170 Pfam Histone-like transcription factor (CBF/NF-Y) and archaeal histone 46 114 IPR003958 -
Mibi01g0290 170 SUPERFAMILY Histone-fold 47 153 IPR009072 GO:0046982
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi01g0290 47 149 CCAAT-HAP3 Transcription Factor Family AT4G14540 28.155 2.42e-09 52.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-YB Mibi01g0290 CBFD_NFYB_HMF 6.2e-08 CL0012