Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi01g0287 ATGTATCATAATCACCAGAATCAAGCAAAGAACATCCATTCTTCTGCTTCTTCATCAAGAATGGCGATTCCTTCAGAGAGGCATTTGTTCCTTCAAAGTGGGAATGGGTCTGGAGATTCTGGACTTGTGCTTTCAACTGATGCTAAACCAAGGTTGAAATGGACACCAGATCTTCATGCACGATTCATTGAAGCAGTCAATCAGCTGGGAGGAGCTGACAAGGCAACTCCAAAAACAGTAATGAAACTCATGGGGATTCCCGGGCTTACTTTATATCACCTTAAGAGCCATCTTCAGAAGTACAGACTGAGCAAGAATCTGCATGGACAAAGTAGCAGCGGTGTAACACACAAAATCACAACAAATGCAAGTGCCGTTAGTGGAGAAAGAGTACTTTCTGAAGCAAACGGAACTCATCACAATCATATGAACAATCTAACCCTAGGGCCGCAGGCTAATAGCAAAGATTTACATATAAGCGAGGCGTTGCAGATGCAGATTGAGGTGCAGAGAAGGCTAAATGAACAACTTGAGGTTCAAAGACACTTGCAGCTGCGAATAGAGGCGCAAGGGAAATACCTGCAGGCAGTGCTGGAGAAAGCTCAAGAGACACTTGGGAGACAAAACTTAGGAATAGTTGGCCTTGAAGCTGCCAAAGTGCAACTATCAGAACTAGTGTCTAAAGTATCTTCTCAATGTCTGAGTTCTGCTTTTACAGAGCTGAAAGAACTAAACACATACAGCCCCCAGCAGATGATGATGATGAATGCAAGAGGCAACCAACCCATTAATAATAATAATGACTGCTCAATGGACAGTAGTAGCCTCACATCCTGCGACGGTTCTCAAAGGGATCATCATCATCAGGATATGCCAATTGGTGCTGCCATGTGCTTAACAACAACTAGACCTTTTAGTAACCACACCTTCTTGGAACCACATAAGGACGCCTCTTCTGAGCCCAAAAATAATCATAATAATACTAATTTTCTGAAGAATATATCTGCTGAAAGGAATGGTGGGGGCAACTTAACAATGAGCATTGGATCAGTTGAAGGAGAAACGAGAAATGGGAGCAGCATGTATCATGGTGAGAGAATAATAATGGGGAGAGATTCACAAGGGATGAAATTAGCAGTGGATCAGGAAAAAGTTGCCGCTGGAGAAGATTATAGGTTGCCGTACTTTGCTACACCAAGATTAGACCTCAACACCCACCAAGAAAACGATGGTGCGGCGAGTTGCAAACAACTAGACCTCAATGGATTCAGCTGGAACTAA 1281 0.4317 MYHNHQNQAKNIHSSASSSRMAIPSERHLFLQSGNGSGDSGLVLSTDAKPRLKWTPDLHARFIEAVNQLGGADKATPKTVMKLMGIPGLTLYHLKSHLQKYRLSKNLHGQSSSGVTHKITTNASAVSGERVLSEANGTHHNHMNNLTLGPQANSKDLHISEALQMQIEVQRRLNEQLEVQRHLQLRIEAQGKYLQAVLEKAQETLGRQNLGIVGLEAAKVQLSELVSKVSSQCLSSAFTELKELNTYSPQQMMMMNARGNQPINNNNDCSMDSSSLTSCDGSQRDHHHQDMPIGAAMCLTTTRPFSNHTFLEPHKDASSEPKNNHNNTNFLKNISAERNGGGNLTMSIGSVEGETRNGSSMYHGERIIMGRDSQGMKLAVDQEKVAAGEDYRLPYFATPRLDLNTHQENDGAASCKQLDLNGFSWN 426
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi01g0287 426 Pfam MYB-CC type transfactor, LHEQLE motif 158 204 IPR025756 -
Mibi01g0287 426 SUPERFAMILY Homeodomain-like 48 104 IPR009057 -
Mibi01g0287 426 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 46 106 IPR017930 -
Mibi01g0287 426 Pfam Myb-like DNA-binding domain 51 102 IPR001005 -
Mibi01g0287 426 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL11 16 317 IPR044848 GO:0003700
Mibi01g0287 426 Coils Coil 160 180 - -
Mibi01g0287 426 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 49 104 IPR006447 GO:0003677
Mibi01g0287 426 FunFam Myb family transcription factor 48 106 - -
Mibi01g0287 426 Gene3D - 48 106 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi01g0287 Mibi-ChrMibi01 2830729 2833013 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi01g0287 81 426 G2-like Transcription Factor Family AT3G04030 45.983 1.08e-74 234
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Mibi01g0287 Myb_DNA-binding 3.8e-08 CL0123
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi01g0287 01 2830729 2833013 Mibi07g0435 07 5394503 5397146 CCT