Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi01g0285 ATGCAGACATGCAGTCCTGTGGCCCCTCACCCCAATGAAAGAACCAATAAGAAAACTCAGACGGAAAAAGCAAGGGAATGGTCTGAAGAGCTTTGCATGGCGACCCACAGAATGGGAGAAACTGGTTTATCGGAGTCAGGACCTTCAACTTCGAGTCACCTGCATGCCCCTTATGGGGTTCTTCATGGGATTAGTTCTCCTTCATCCAGCTTAATCAATCAAGGATCTGGTTATTATTTTGGAGGATTGGAAGAGGCAATTCTGCAAGGAGTCAAGATTAGGAATGAAGAAGCCAAAGCATCTTTATTCACAGGCAAGCCTGCAACTACACTAGCAATGTTTCCTTCATGGCCCATGAGATTCCAGCACACCCCAAGAGAAGGTGGTTCAAAATCCGGAGGAGAGAGCACAGATTCAGGATCAGGATTGCATACTATTTCAAGCAAAACAGAAGCACAGTTTGAACCAGAATCTGAATCTCCCATAAGTAAAAAAGCATCTTGTACAGACTATCAGGCTTTCGATCAGCAGCAGAAACAGCAGCTACAGCAACTAGAACAGGAGATGGCAAGCGATGCCTCAAGATGCCAAACACTGAATCATCAGAATCAATCAGCCACTAAACCATTTCAGGCAAAGAGGAAAGGAGGCGGTTCTACATCAGAGAAGCAACTTGATCCAAAGACATTGAGGCGTCTAGCTCAAAACAGAGAGGCTGCAAGGAAAAGCCGTCTCAGAAAAAAGGCTTACGTGCAGCAGCTAGAAACGAGTAGATTAAAGCTTTCCCAGCTTGAACAAGAGCTTCAAAGAGCACGCTCACAGGGACTAATGATGGGCTGTGGTGGTGGGACTGCTAGTGCCAATATGAGTTCCGGAGCAGCAATATTTGACATGGAATATGGGAGATGGTTGGAAGAAGACCAGAGGCACATGGAGGAGCTGCGGCGGAAGTTGGAGGCGGCTGTGTCGGACAATGAACTGAGAGTGATGGTGGAGAGTTATCTAAGACATTACGATGAGATATTTGAGCTGAAGGAAGTGGCAGCAAAATCAGACGTGTTCCATGTCATGAACGGAATGTGGACCACCCCCGCCGAGCGATGCTTCCTCTGGATTTCCGGCTTCAGACCCTCCGATCTCATCGGGATGTTGATACAACAGCTAGAGCCAGTGGCGGAGCAGCAAATAGTGGGGATGTGTGAGCTGAGGCAGTCAACACAGCAAGCAGAGGAGGCTCTGAGTCAAGGGCTTGACCAGCTTCAACACTCTCTTCTTCACACCGTCGTGGGAGGCCTTGCCCTCGACGGCGTCCACCAGATGTTTCTTGCCATGACCAAGCTTTCTAATCTTGAAGCCTTTATCCGCCAGGCTGATAATTTGAGACAGCAAACACTTCACCAATTGTGTCGACTACTAACAGTTCGTCAAGCAGCAAAATGTTTTCTTGTAATCGGAGAATACTATGGTCGTCTTCGAGCTCTTAGTTCTCTATGGGCATCACGACCCCGAGAGTCATTGATCAACGATGAGACATGCCACCAAATAGCAACGAACATGCCAGTAGTTCATCAGTCGTCCCAGAATCATTTCTCGAGTTTCTGA 1602 0.4769 MQTCSPVAPHPNERTNKKTQTEKAREWSEELCMATHRMGETGLSESGPSTSSHLHAPYGVLHGISSPSSSLINQGSGYYFGGLEEAILQGVKIRNEEAKASLFTGKPATTLAMFPSWPMRFQHTPREGGSKSGGESTDSGSGLHTISSKTEAQFEPESESPISKKASCTDYQAFDQQQKQQLQQLEQEMASDASRCQTLNHQNQSATKPFQAKRKGGGSTSEKQLDPKTLRRLAQNREAARKSRLRKKAYVQQLETSRLKLSQLEQELQRARSQGLMMGCGGGTASANMSSGAAIFDMEYGRWLEEDQRHMEELRRKLEAAVSDNELRVMVESYLRHYDEIFELKEVAAKSDVFHVMNGMWTTPAERCFLWISGFRPSDLIGMLIQQLEPVAEQQIVGMCELRQSTQQAEEALSQGLDQLQHSLLHTVVGGLALDGVHQMFLAMTKLSNLEAFIRQADNLRQQTLHQLCRLLTVRQAAKCFLVIGEYYGRLRALSSLWASRPRESLINDETCHQIATNMPVVHQSSQNHFSSF 533
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi01g0285 533 SMART brlzneu 224 290 IPR004827 GO:0003700|GO:0006355
Mibi01g0285 533 Coils Coil 304 324 - -
Mibi01g0285 533 MobiDBLite consensus disorder prediction 179 226 - -
Mibi01g0285 533 FunFam BZIP family transcription factor 227 276 - -
Mibi01g0285 533 CDD bZIP_HBP1b-like 228 279 - -
Mibi01g0285 533 Pfam bZIP transcription factor 228 268 IPR004827 GO:0003700|GO:0006355
Mibi01g0285 533 Gene3D - 227 277 - -
Mibi01g0285 533 Pfam Seed dormancy control 310 384 IPR025422 GO:0006351|GO:0043565
Mibi01g0285 533 MobiDBLite consensus disorder prediction 129 164 - -
Mibi01g0285 533 SUPERFAMILY Leucine zipper domain 228 270 IPR046347 GO:0003700|GO:0006355
Mibi01g0285 533 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 226 270 IPR004827 GO:0003700|GO:0006355
Mibi01g0285 533 MobiDBLite consensus disorder prediction 120 164 - -
Mibi01g0285 533 MobiDBLite consensus disorder prediction 179 210 - -
Mibi01g0285 533 PANTHER TRANSCRIPTION FACTOR TGA9 177 504 - -
Mibi01g0285 533 Coils Coil 175 202 - -
Mibi01g0285 533 ProSiteProfiles DOG1 domain profile. 293 501 IPR025422 GO:0006351|GO:0043565
Mibi01g0285 533 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 231 246 IPR004827 GO:0003700|GO:0006355
Mibi01g0285 533 Coils Coil 247 274 - -
Mibi01g0285 533 MobiDBLite consensus disorder prediction 1 26 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi01g0285 Mibi-ChrMibi01 2810468 2817069 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi01g0285 208 533 bZIP Transcription Factor Family AT1G08320 68.098 1.71e-160 459
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Mibi01g0285 DOG1 8e-29 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi01g0285 01 2810468 2817069 Mibi07g0432 07 5346467 5353232 CCT
Mibi01g0285 01 2810468 2817069 Mibi01g0285 01 2810468 2817069 ECH