Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi01g0275 ATGGGTGGAGGCGCTTTCACACATTCAATTCCTTACCCCAGGTTGGGATATCTTCCATATTCTTTCCAACGAAGACGAGGATCCAGGGAAAAAAAAATGGCAGAAGAACATCGATGTCAGGCTCCACGCTTGTGCGCTAACAACTGCGGCTTCTTTGGTAGCCCAGCCACACAAAACCTATGTTCCAAGTGCTACCGAGATTTACAGCTCAAAGAACAACAATCCTCCTCTGCTAAATTGGTTCTCAACCAAACCCTAGCTCCTCCATCTTCGACGATCTCGCAATCGTCTTCTGCGCCTGAACAGATCCACGGTACTTCGTCCTCTCCGGCACTCGATCCGCCGCCCACGGCGGTCGAGGTCAAGAGTGGATCCTCGGCGAAGCCACCGGCTCAGCCGAGCCGGTGCGTGACTTGCCGGCGGCGCGTGGGGCTCACAGGATTCAAGTGCAGGTGCGGATCCACATTTTGTGGGTCCCACCGGTACCCGGAACAGCACGGATGTGAGTTCGACTTCAAGGGCATGGACAGAGAGCAGATCGCGAAGGCGAATCCTGTGGTGAAGGGCGAAAAGCTCGACAAGATCTGA 588 0.5476 MGGGAFTHSIPYPRLGYLPYSFQRRRGSREKKMAEEHRCQAPRLCANNCGFFGSPATQNLCSKCYRDLQLKEQQSSSAKLVLNQTLAPPSSTISQSSSAPEQIHGTSSSPALDPPPTAVEVKSGSSAKPPAQPSRCVTCRRRVGLTGFKCRCGSTFCGSHRYPEQHGCEFDFKGMDREQIAKANPVVKGEKLDKI 195
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi01g0275 195 ProSiteProfiles Zinc finger A20-type profile. 39 73 IPR002653 GO:0003677|GO:0008270
Mibi01g0275 195 MobiDBLite consensus disorder prediction 88 134 - -
Mibi01g0275 195 SUPERFAMILY AN1-like Zinc finger 123 190 IPR035896 -
Mibi01g0275 195 Gene3D - 111 191 IPR035896 -
Mibi01g0275 195 ProSiteProfiles Zinc finger AN1-type profile. 130 176 IPR000058 GO:0008270
Mibi01g0275 195 SMART AN1_Zf_4 136 173 IPR000058 GO:0008270
Mibi01g0275 195 MobiDBLite consensus disorder prediction 88 113 - -
Mibi01g0275 195 FunFam Zinc finger AN1-type containing 6 113 191 - -
Mibi01g0275 195 Pfam A20-like zinc finger 43 66 IPR002653 GO:0003677|GO:0008270
Mibi01g0275 195 SMART A20_3 42 66 IPR002653 GO:0003677|GO:0008270
Mibi01g0275 195 Pfam AN1-like Zinc finger 138 172 IPR000058 GO:0008270
Mibi01g0275 195 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 44 89 - -
Mibi01g0275 195 PANTHER AN1-TYPE ZINC FINGER PROTEIN 41 195 - -
Mibi01g0275 195 Gene3D - 32 102 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi01g0275 Mibi-ChrMibi01 2703405 2704364 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi01g0275 33 195 C2H2 Transcription Factor Family AT3G52800 53.448 9.09e-47 149