Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi01g0262 ATGAACGGTGATGGCCGAAGATGGGACCGCAAAGACCCCCGCAGAGCCAAGAAGCAGAAGCTAATCCGCAACGCCGATGAAGAACTTGAGGCTAAATTAGGGTTCGATCTTTTCTCTGAGGGCGATAAACGACTTGGATGGTTGCTAAATTTTTCATCCTCATCTTGGGAGGATGAAGATACACACAAAGTCTATAGTTGTGTGGATCTATATTTTGTTACTCAGGATGGTTCTATGTTCAAGTCGAAGTACAGATTTCAGCCTTATTTCTATGTGGCTACAAAGGATAAAATGGAAATGGATGTTGAAGCATTTCTGAGACGGCGTTATGAAAATCAGATTGCAGATGTTGAAATTAAAGAGAAGGAAGACCTTGATCTTAAAAATCATTTGTCTGGGTTACAAAAATCATATTTAAAGCTATCCTTTGACACTGTGCAACAATTGATGAATGTGAAGAGTGACCTGATGCATGTTGTTGAAAGAAATCAGGCAAGATCTGATGCAGCAGAAGCTTATGAATCCATATTAACTGGAAGAAGGGAGCAAAAATCTCAAGATTTTCTAGATTATATAATTGATCTCCGTGAATATGATGTTCCTTACCATGTTCGCTTTGCCATTGATAATGATATTCGATGTGGCCAATGGTATGATGTTAGTGTGTCCAATACTGGTGTTACACTCGAGAGGAGGACCGATCTTCTGCAGCGTGCTGAAGTTCGTATTTGTGCTTTTGATATAGAGACCACAAAACTTCCATTAAAGTTCCCTGATGCTGACTATGACTTAATTATGATGATTTCATACATGGTAGATGGACAAGGGTATTTGGTCATAAATAGAGAGTGTGTTGGGGACGACATAGAGGATTTGGAGTACACTCCAAAACCAGAGTTTGAAGGATATTTTAAGGTGACGAATGTTCAAAATGAGGTAATGTGTGTTGTCTTTTTGCTAAGAATTTGGGATTACTTGCAGGTTGAACTTCTTAGATTGTGGTTTTCTCATATGCAAGAGGTGAAACCCAGTATATATGTTACGTATAATGGTGATTTCTTTGATTGGCCATTTATGGAAAGAAGGGCAGCTCATCATGGGTTCAAAATGCGTGATGAGTTGGGTTTTCAATGTGACAATAATCAAGGGGAATGTCGAGCCAAATTTGCTTGCCATCTTGATTGCTTTGCTTGGGTTAAACGTGACAGTTATCTTCCTCAGGGGAGTCAAGGCCTGAAGGCTGTTACAAAAGCAAAGCTGGGTTATGATCCCCTAGAGGTGAACCCTGAGGATATGGTTCGCTTTGCAAAGGAAAAACCTCAGATGATGGCCTCTTATTCCGTTTCTGATGCTGTGTCAACTTATTACTTGTATACAACCTATGTTCATCCCTTTATTTTTTCTCTTGCAACAATTATACCCATGTCACCAGATGAGGTTTTGCGTAAAGGTAGTGGGACCCTCTGTGAAATGTTGCTCATGGTTCAGGCATACCAGGCTAATGTGATCTGCCCCAACAAGCACCAGTCTGATCCTGAGAAGTTTTACAACAGTCACCTTCTTGAGAGCGAGACATACATTGGTGGTCATGTGGAATGCCTTGAAAGTGGTGTTTTTAGATCTGATCTTCCAACTAGTTTTACCCTTGTACCTTCAGCATACGAGCAATTGATCAACAATCTTGATCGAGACCTGCAATATGCTATAAGAGTAGAGGGTAAGATGGACTTGGATACCGTCTCTAATTATGATGAAGTTAAGAATGCTATCATGGAAAAGCTTATAAAATTGCGAGACAAGCCAATATGTGAAGAATGCCCCCTCATTTATCATTTGGATGTAGCTGCTATGTATCCAAACATAATCTTAACAAACCGGCTTCAGCCGCCTTCAATAGTTACAGATGAGGTCTGCACTGCATGTGACTTCAACCGTCCTGGAAAGACCTGCCTTCGAAAACTTGAGTGGGTTTGGCGTGGAGAAATTTTCATGGCAAAGAAAAGTGATTATTATCATTTAAAGAAGCAGATTGAGTCAGAGTTTGTTGAAAGTGCTGATAGGCAGTCATCTAAATCATTTCTTGACCTGCCCAAGTCAGAGCAGCAATCCAGGCTAAAGGAACGTTTGAAGAAATACTGCCAGAAGGCATACAAACGGGTACTTGATAAACCAGTTACTGAACTTCGTGAGGCAGGGATCTGCATGCGTGAAAATCCATTTTATGTTGACACTGTTCGCAGTTTTCGTGATAGAAGATATGAATACAAAGGTCTTAATAAGGTTTGGAAGGGAAAGTTGTCAGAAGCCAAGGCCAGCGGAAATTCTATAAAGATCCAAGAAGCACAAGACATGGTTGTGCTCTATGATTCATTGCAACTTGCGCACAAGTGCATACTTAATTCCTTCTATGGATATGTCATGCGCAAGGGGGCAAGATGGTACTCCATGGAAATGGCTGGAGTTGTTACTTATACTGGCGCAAAAATCATTCAGAATGCTCGCCTGCTTGTTGAGAAAATAGGAAAGCCACTTGAACTAGACACGGATGGTATTTGGTGTGCACTTCCTGGATCTTTTCCAGAAAATTTCACTTTTAAAACAAAAGACTCAAAGAGGAAATTGACTATTTCATACCCTTGTGTCATGCTTAATGTTGATGTGGCTAGGAATAATACAAATGATCAGTACCAGACACTCACTGATCCAGTTAGGAAATCTTACACAACTCACAGCGAATGCTCTATTGAATTTGAAGTTGATGGACCATACAAGGCAATGATCCTTCCAGCTTCTAAAGAAGAAGGAATTCTAATTAAGAAGCGTTATGCTGTTTTTAATGATGACGGAACGCTAGCAGAGCTCAAAGGTTTTGAGATCAAGAGGAGAGGTGAACTGAAGCTAATAAAAGTTTTTCAGGCAGAGCTTTTTGACAAGTTTCTCCACGGATCAACCATAGAGCAATGTTATTCAGCTGTTGCTAATGTGGCAAACCGCTGGCTTGATCTTCTTGATAACCAAGGAAGGGATATTGCTGATAGCGAGTTGCTTGATTATATATCAGAATCAAGTACCATGAGCAAGTCTTTAGCTGATTATGGCGAGCAGAAGTCTTGTGCTGTTACCACTGCTAGACGGCTTGCTGACTTTCTTGGTGATGCTATGGTCAAAGATAAAGGCCTCCGCTGTCAGTACATAGTAGCATGTGAACCTAAGGGAACACCTGTAAGCGAGCGTGCTGTTCCTGTGGCAATATTTGAAACAGATGCTGAAGTAATGAAGTTTTATGTTCGAAAATGGTGCAAGATCTCAGCTGATGTTGGCATTCGGTCCATTATTGATTGGTCCTATTATAGGCAACGGCTGAGCTCTGCAATTCAAAAAATTATCACCATTCCTGCTGCAATGCAGAAGGTTGCAAATCCTGTCCCTAGGGTGGTTCATCCTGATTGGTTGCACAAAAAGGTTCGGGAGAAGCAGGACAAATTCCGCCAACGAAAATTAGTTGATGTCTTTAATTGCATGAACAGGGATGAACTCTCTAAAAAGCAAAGTAATTCTGATAATGTCTGCCATGTTATGAATGAAGAAGCTACTAATGACTTGGAGGATTTTGGTAACAAGACCAGGAACAATATAAGTGGACCTAGACCAATTATACGACATTATGAAGCTAATAATGAGCAGCACTCAGTGAAGACTTATGGCGAAGAAGATTCTGAGCAGAGACATGATGATGATCATGGTAATGAGCATCAGCCGCTAACAGAGTTAGAACACAATGAATTGTCATCTGAAAATGTTGACAAAACAGTAAATTATCAAGGATGGCTCCAGACAAAGAAGAGAAAGTGGAAAGATATAATAGCAAGAAGAAAGAAGCAAAGATTGGAGAATTCAAAGAAATCAGACCGTGCTAATAGCACTCTTGAAAGACAGAGAAATAAGATTGACCATAAGGCTCGGGGAAGAAATAATGTTGACTCATACTTCAGAAGGCACGAGGCAGTACTGACGCGATCCCATTGGCAGATAATTCAACTAATTCACAGCTCACAGATGGGCCAATTTTTTGCTTGGGTTGTTGTTGATGGAGTTATGCTTAAGATTCCAGTTTCTGTTCCTAGGATCTTTTACCTCAATTCTAGGTCACCAATTACTGAACAATTTATGGGTAAACGTGTCAATAAGACTCTTCCACATGGAAGGCATAGTTATAACCTGTATGAGGTTACAACTAATGAAGTTCAATTTAAAGAAACAAGCAGAAAGCTTGCAGCTCTTCTGGCAGATCCTGACATTGAGGGAATATATGAAACAAAAGTGCCACTGGAATTTAATGCCATAGTCCAGCTTGGTTGTGTATGCAAGGTGGACAAAACTGCTAAAAAACGCAGTCTTCAGGAACCTTGGAATCTGAATGAATTGCATATGAAGACCACTACAGAATGCTCTTATCTTGAACAATCCATATCCTTCTTTTACTTGTATCATAGCATCTCCGAAGGTCGGGCCATATATGTTGGATATTTTCCTGCATCAAAAGCTATATCTGTTGTGGTAGCTAATCCGTATCAAAACAAGGACTTATCTCCAGTATTTCTTGAAAGACAATACCGTGATGCTTGTGAAGCTTTGTCTATTGAGACACCTCCCAAAAATGGTATTAGATTTAAGGTGGACTATGTTTTGCATGTCAAGGATGCTGAAACGATGATGCAAAGAGTGATAAACGATCAAAGGAATGAGCATCATGGGCCTATGGTTGCTGTCATTGAATGTCCTGATCCACAACTAATGAAATTGGCTATTCGAGCTCTAGATGATTTTCCATGCCTGAACATTCCTTCCAATGCACGTGATAGTCAGTACCAGATTCTTGGATGGCAACAAGTTGCTGCAAAAACTGGAATGCATCGCTGTGCTGCTTCAGTCCAGTGGTTAAATGAGAGAATCTCTCTCTCAAGATATGCTCATGTGCCTTTAGGGAATTTTGAACTTGACTGGCTCATATTTACAGCAGATATCTTCTTTTGTAGAGCATTGAGAGATAATCAACAGGTACTTTGGATATCTGATGATGGCCTTCCTGATTTAGGCGGAATTAATGAAGAAGAGACATGTTTTGCTGACGAGGTCCACCAACCTGTTCTTACATATCCCGGAGCTTACAGAAAAGTTACAGTAGAGCTAAAGATTCACCACCTGGCCGTAGATGCTCTTCTAAAAGGCAACCAAGTCAATGAGTTGGAAGGAGGTGCTTTGTTGGGATTTGATCATGAAATGAACTCTCGACCATTTGCCAATAATGATCAGAATGGCATTGATGAGGCCACCTCATGTGCACGTGCTTTTCGAGTCCTAAAGCAGTTAATCCAACGCTGCCTTGCAGATGCAGTTACATCTGGAAATGTATATGCTGATGCAATATTGCAACATCTATATCGATGGCTATGCAGCCCTCAATCAAAACTTCACGATCCCGCTCTTCACCAATTACTCCACAAGGTCATGCAGAAGGTTTTTGCACTGTTGTTGGCGGAGCTCCGTAAATTGGGTGCATCAATTGTTTTTGCAAATTTCTCAAAAATAATTGTAGACACAGGAAAATATGATCTGTCTGCAGCCAAGGCTTACTGTGATAGTTTGTTACGAACTCTACAATCTAGAGATTTATTTGAGTGGATTGAACTTGAACCGCTTCAGTTCTGGAACTCATTGCTATTCATGGATCAGTATAACTATGGTGGAATACCAGCGAAATCTGATGAAGCTATAAATGATGAATCTCAAGTTGACATTATATCGAGTTGGAACATTGCCGACTACTTACCAAAGAAAATCCAGGACCACTTTGTTTTCATTGTTTCTCAATTCATGTACATTCCCTGGAACTATGCGCAAAAACAAGCTGCAATACCAGCTTCATCGCAAAATGGCGAATCCTGCACGCCATCAATCACTGTAGGAGCTGCAGAGAAATTTGAATCGCATGTGACAGAATATATAAAAGGGCAGATCAGCTCTTACTTCACAGATAAACTTCTGGGAATTGTTGGCGATATTATGCATCATATGAAGGAGATAAGACTAGAAAATGACCAGAACGTATCATCTAGCAATCCTCAACCTGCAGCTGATTTCCACAAAGGGGATGCAGCCTTGGAATTTATCAAGCATGTCTGTGCCGTTCTCGCCCTGGATCAGAGTGTGCAGCATGATGTTCTGGTCATGAGAAAGAATTTATTGAGATTTGTTCGTGTGAGGGAGTTTGCACCCGAAGCTGAGTTTCGTGATCTGAGACATTCATTCGTATTACCCAATGTCATCTGCAGCTACTGCAATGACTGCAGAGATTTGGATTTGTGCCGTGACTCAGCTTTACTAAGCCAGGAGTGGCATTGTGGCGTGCCGCAGTGTGGGCAGCCATATGATCGTGAGGTGATGGAAAATGCACTTCTTCAGATTGTACGGCAGAGGGAACGACTATACCACTTGCAAGATCTGGCGTGTGTCAGATGCTACCAGGTGAAAGCTGCTCATTTAGCTGAGCAATGCGCTTGTGCGGGATCATACAAGTGCAAGGAAGATAGAACTGAATTTCGCAATAAGATGCAGGTTTTCTACAACATAGCTGTTCGCCAAAAATTTCAACTTCTTCAAGAATGCACCTCATGGATTCTAGAATTGAGATAG 6693 0.4092 MNGDGRRWDRKDPRRAKKQKLIRNADEELEAKLGFDLFSEGDKRLGWLLNFSSSSWEDEDTHKVYSCVDLYFVTQDGSMFKSKYRFQPYFYVATKDKMEMDVEAFLRRRYENQIADVEIKEKEDLDLKNHLSGLQKSYLKLSFDTVQQLMNVKSDLMHVVERNQARSDAAEAYESILTGRREQKSQDFLDYIIDLREYDVPYHVRFAIDNDIRCGQWYDVSVSNTGVTLERRTDLLQRAEVRICAFDIETTKLPLKFPDADYDLIMMISYMVDGQGYLVINRECVGDDIEDLEYTPKPEFEGYFKVTNVQNEVMCVVFLLRIWDYLQVELLRLWFSHMQEVKPSIYVTYNGDFFDWPFMERRAAHHGFKMRDELGFQCDNNQGECRAKFACHLDCFAWVKRDSYLPQGSQGLKAVTKAKLGYDPLEVNPEDMVRFAKEKPQMMASYSVSDAVSTYYLYTTYVHPFIFSLATIIPMSPDEVLRKGSGTLCEMLLMVQAYQANVICPNKHQSDPEKFYNSHLLESETYIGGHVECLESGVFRSDLPTSFTLVPSAYEQLINNLDRDLQYAIRVEGKMDLDTVSNYDEVKNAIMEKLIKLRDKPICEECPLIYHLDVAAMYPNIILTNRLQPPSIVTDEVCTACDFNRPGKTCLRKLEWVWRGEIFMAKKSDYYHLKKQIESEFVESADRQSSKSFLDLPKSEQQSRLKERLKKYCQKAYKRVLDKPVTELREAGICMRENPFYVDTVRSFRDRRYEYKGLNKVWKGKLSEAKASGNSIKIQEAQDMVVLYDSLQLAHKCILNSFYGYVMRKGARWYSMEMAGVVTYTGAKIIQNARLLVEKIGKPLELDTDGIWCALPGSFPENFTFKTKDSKRKLTISYPCVMLNVDVARNNTNDQYQTLTDPVRKSYTTHSECSIEFEVDGPYKAMILPASKEEGILIKKRYAVFNDDGTLAELKGFEIKRRGELKLIKVFQAELFDKFLHGSTIEQCYSAVANVANRWLDLLDNQGRDIADSELLDYISESSTMSKSLADYGEQKSCAVTTARRLADFLGDAMVKDKGLRCQYIVACEPKGTPVSERAVPVAIFETDAEVMKFYVRKWCKISADVGIRSIIDWSYYRQRLSSAIQKIITIPAAMQKVANPVPRVVHPDWLHKKVREKQDKFRQRKLVDVFNCMNRDELSKKQSNSDNVCHVMNEEATNDLEDFGNKTRNNISGPRPIIRHYEANNEQHSVKTYGEEDSEQRHDDDHGNEHQPLTELEHNELSSENVDKTVNYQGWLQTKKRKWKDIIARRKKQRLENSKKSDRANSTLERQRNKIDHKARGRNNVDSYFRRHEAVLTRSHWQIIQLIHSSQMGQFFAWVVVDGVMLKIPVSVPRIFYLNSRSPITEQFMGKRVNKTLPHGRHSYNLYEVTTNEVQFKETSRKLAALLADPDIEGIYETKVPLEFNAIVQLGCVCKVDKTAKKRSLQEPWNLNELHMKTTTECSYLEQSISFFYLYHSISEGRAIYVGYFPASKAISVVVANPYQNKDLSPVFLERQYRDACEALSIETPPKNGIRFKVDYVLHVKDAETMMQRVINDQRNEHHGPMVAVIECPDPQLMKLAIRALDDFPCLNIPSNARDSQYQILGWQQVAAKTGMHRCAASVQWLNERISLSRYAHVPLGNFELDWLIFTADIFFCRALRDNQQVLWISDDGLPDLGGINEEETCFADEVHQPVLTYPGAYRKVTVELKIHHLAVDALLKGNQVNELEGGALLGFDHEMNSRPFANNDQNGIDEATSCARAFRVLKQLIQRCLADAVTSGNVYADAILQHLYRWLCSPQSKLHDPALHQLLHKVMQKVFALLLAELRKLGASIVFANFSKIIVDTGKYDLSAAKAYCDSLLRTLQSRDLFEWIELEPLQFWNSLLFMDQYNYGGIPAKSDEAINDESQVDIISSWNIADYLPKKIQDHFVFIVSQFMYIPWNYAQKQAAIPASSQNGESCTPSITVGAAEKFESHVTEYIKGQISSYFTDKLLGIVGDIMHHMKEIRLENDQNVSSSNPQPAADFHKGDAALEFIKHVCAVLALDQSVQHDVLVMRKNLLRFVRVREFAPEAEFRDLRHSFVLPNVICSYCNDCRDLDLCRDSALLSQEWHCGVPQCGQPYDREVMENALLQIVRQRERLYHLQDLACVRCYQVKAAHLAEQCACAGSYKCKEDRTEFRNKMQVFYNIAVRQKFQLLQECTSWILELR 2230
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi01g0262 2230 MobiDBLite consensus disorder prediction 1291 1317 - -
Mibi01g0262 2230 Gene3D Palm domain of DNA polymerase 768 952 IPR023211 -
Mibi01g0262 2230 SUPERFAMILY DNA/RNA polymerases 501 1130 IPR043502 -
Mibi01g0262 2230 Pfam DNA polymerase family B 771 1085 IPR006134 GO:0000166|GO:0003677
Mibi01g0262 2230 SMART DUF1744_2 1533 1917 IPR013697 GO:0003887|GO:0005634|GO:0006260|GO:0008270
Mibi01g0262 2230 CDD POLBc_epsilon 519 1137 - -
Mibi01g0262 2230 Gene3D DNA Polymerase, chain B, domain 1 51 231 - -
Mibi01g0262 2230 FunFam DNA polymerase epsilon catalytic subunit 771 952 - -
Mibi01g0262 2230 FunFam DNA polymerase epsilon catalytic subunit 56 227 - -
Mibi01g0262 2230 PANTHER DNA POLYMERASE EPSILON CATALYTIC SUBUNIT A 16 2228 IPR029703 GO:0003677|GO:0003887|GO:0006260|GO:0006281|GO:0008622
Mibi01g0262 2230 FunFam DNA polymerase epsilon catalytic subunit 956 1140 - -
Mibi01g0262 2230 SMART polmehr3 239 857 IPR006172 GO:0000166|GO:0003676|GO:0003887
Mibi01g0262 2230 Gene3D - 238 483 IPR036397 GO:0003676
Mibi01g0262 2230 Pfam Domain of unknown function (DUF1744) 1547 1917 IPR013697 GO:0003887|GO:0005634|GO:0006260|GO:0008270
Mibi01g0262 2230 FunFam DNA polymerase epsilon catalytic subunit 240 483 - -
Mibi01g0262 2230 Pfam DNA polymerase family B, exonuclease domain 74 415 IPR006133 -
Mibi01g0262 2230 CDD DNA_polB_epsilon_exo 240 458 - -
Mibi01g0262 2230 MobiDBLite consensus disorder prediction 1201 1228 - -
Mibi01g0262 2230 Gene3D - 956 1140 IPR042087 -
Mibi01g0262 2230 SUPERFAMILY Ribonuclease H-like 57 482 IPR012337 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi01g0262 1 2120 Core DNA Replication Machinery Family AT1G08260 70.663 0.0 3076