Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi01g0260 ATGGAGACATGGGTGGAGGATGTGAGCGACGACCTCCAGAGCCTAAGCTTCGCCTCCACCACGGCCACCGATATCTCCGAATCAACCACCCTAACGGACTCAACCACCACAACCACCACCAAACCCCACGCGCCGTCGTCCGACCCTTGCTGGGCCGCCATTCAGCGGATCCGATCGGAGTCAGTGAGCCGGCGCATATCACCGTCGGACCTGCGGTTCAGGCACCGTCTGGGGGCGGGGGACATAGGGTCGGTGTACCTGGCAGAGCTGAAATATAATGGGGAGGAGGGAAGTGTGGTGTTGGCGGCGAAAGTGATGGACAAGAAGGAGCTGGCTAGTAGGAGTAAGGAAGGGAGGGCGAGGACAGAAAGGGAAATACTGGGAATGTTGGACCACCCTTTTCTTCCCACCCTCTATGACGCCATTGATTCTCCCTCTTGGATCTGCCTCTTAACTGAATTCTGCCCCGGCGGTGATTTGCACATCCTCCGACAACGACAGCCCAACAAGCGCTTCCTTGAACCCGCCGTCAGGTTTTATGCTTCGGAGGTAGTGGTGGCTTTAGAATACCTTCATATGCTGGGGATAGTGTATCGTGATCTGAAGCCGGAGAACGTGTTAGTCCGATCGGACGGCCATATCATGCTCACCGACTTTGACCTATCGTTGAAAGGCGACGATTCCACATCAACGGCTCAGATCATTTCTGAACAAAACCCAGCTCCGTCGGTCCCACAAAATAAAGATTCCCACATCGATCCCCCTCCTTTTGCCTCCTCTTCTTGCATACTTCCCAACTGTATAGTCCCCGCCGTATCATGCTTCCACCCAAAACGCAAGCGCAAGAAGAAGCAAAGCCTGCGTAATGGGCCTGAGTTTGTGGCCGAGCCCATTGATGTGAGGTCCATGTCATTCGTTGGGACCCACGAGTACCTGGCGCCGGAGATAGTCTCCGGCGAGGGACACGGCAGCGCCGTCGACTGGTGGACGTTGGGGATATTTATATTTGAGCTGTTCTACGGAGTGACGCCGTTTAGGGGCGTGGACAATGAGCTAACCCTGGCTAACATCGTGGCTCGAGCCCTCGAGTTCCCAAAAGAGCCAGCCGTGCCGGCCACGGCAAAAGATCTTATATCGCAGTTATTGGCTAAGGACCCAACGAGACGGTTAGGGTCAAAGATGGGCTCGTCCGCCATTAAACACCACCCCTTTTTCCAAGGGGTGAACTGGGCATTGTTGAGGTGTACACCTCCACCCTTTGTGCCCCCACCTTTTACTAAAGAATCTGTATCTGATGAAAGTTGTCCCCAGACTCCTATTGATTATTACTGA 1332 0.5443 METWVEDVSDDLQSLSFASTTATDISESTTLTDSTTTTTTKPHAPSSDPCWAAIQRIRSESVSRRISPSDLRFRHRLGAGDIGSVYLAELKYNGEEGSVVLAAKVMDKKELASRSKEGRARTEREILGMLDHPFLPTLYDAIDSPSWICLLTEFCPGGDLHILRQRQPNKRFLEPAVRFYASEVVVALEYLHMLGIVYRDLKPENVLVRSDGHIMLTDFDLSLKGDDSTSTAQIISEQNPAPSVPQNKDSHIDPPPFASSSCILPNCIVPAVSCFHPKRKRKKKQSLRNGPEFVAEPIDVRSMSFVGTHEYLAPEIVSGEGHGSAVDWWTLGIFIFELFYGVTPFRGVDNELTLANIVARALEFPKEPAVPATAKDLISQLLAKDPTRRLGSKMGSSAIKHHPFFQGVNWALLRCTPPPFVPPPFTKESVSDESCPQTPIDYY 443
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi01g0260 443 FunFam serine/threonine-protein kinase D6PK-like 300 423 - -
Mibi01g0260 443 MobiDBLite consensus disorder prediction 26 48 - -
Mibi01g0260 443 FunFam serine/threonine-protein kinase D6PK-like 159 226 - -
Mibi01g0260 443 ProSiteProfiles Protein kinase domain profile. 71 405 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi01g0260 443 PANTHER FLIPPASE KINASE 1-RELATED 23 426 - -
Mibi01g0260 443 ProSitePatterns Serine/Threonine protein kinases active-site signature. 196 208 IPR008271 GO:0004672|GO:0006468
Mibi01g0260 443 Pfam Protein kinase domain 302 405 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi01g0260 443 Pfam Protein kinase domain 74 244 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi01g0260 443 Gene3D Transferase(Phosphotransferase) domain 1 159 236 - -
Mibi01g0260 443 Gene3D Phosphorylase Kinase; domain 1 70 158 - -
Mibi01g0260 443 SMART serkin_6 71 405 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi01g0260 443 MobiDBLite consensus disorder prediction 26 45 - -
Mibi01g0260 443 SUPERFAMILY Protein kinase-like (PK-like) 52 431 IPR011009 -
Mibi01g0260 443 Gene3D Transferase(Phosphotransferase) domain 1 301 423 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi01g0260 Mibi-ChrMibi01 2559104 2564071 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi01g0260 1 443 AGC Kinase Gene Family AT3G44610 67.991 0.0 583
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Mibi01g0260 Pkinase 2.1e-32 CL0016