Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi01g0257 ATGGACGACTCGGAGGCGCTCGGAAGTTCCAACCCTAACGATGAAGCAAAAGCAAAGAAGCAGAAGGTTGTGGTGATAATGGGTCCCACTGGCTCTGGGAAGTCAAGGCTCGCTATTGATCTGGCTTCATACTTCCCGGTCGAAGCTATAAACGCTGATTCCATGCAGGTTTACCGAGGCCTCGATGTTCTCACCAATAAAGTTCCACTCTTTGACCAAAAGGGGGTGCCTCACCATCTTCTTGGTACCGTAAGCCCAAACGTGGAATTCACAGCTAAAGACTTTCGAGATTCTGTGATCCCTCTCATCAATGACATATCTGCTCGCAACTGCTTGCCTGTCATAGTCGGCGGTACGAATTATTTTATCCAGGCTCTTGTGAGTCCGTTCCTTTTAGATGAGTCCGTTGAAGATATGGACGAAACCTGTTTGGACAGCCCTTCTGATACTACACCTCTGAATAAGAGTTTCATTCCTGAAAAAGACAGCTCAAACAATGATTACGATTTGCTTAAAGATATTGATCCAGTTGCAGCAAATAGAATGCATCCAAATAACCATAGAAAGATTAGTCAATACCTTAGTTTGTATGCTCGCACTGGAGTTCTTCCAAGCAAACTTTTCCAAGGAAAAGCTGCGGAGAAGTGGGGTCAAGTTGGTAACTCAAGATATGATTGCTGTTTTATATGTGTGGATGCATCTCTCCCTGTACTAGACAGATATGTAGAGCAGAGGGTAGATTGCATGATGGATGCTGGATTACTTAATGAAGTCTATGACATTTACGATCCGAATGCTGACTATAGTCGCGGCTTGCGGCAGGCCATTGGTGTTCGTGAATTTGAACCTCTTCTGAAAACCCATGTAATAGAAGAAATCTACAGAAGAGATAACGAGTCGACTGAGGATTCCAGGAGAGGAAAGGGTGATAAATTGTCTAATGACGATCTAAGGGAGCTCTTGAAGTTGTCTTCTGACACGAAATCCATTTCACTCATGGAAGAAGCAATTGAAAAAGTAAAGGTTAATACACGGAGATTAGTCCGCCGTCAGAAGAGGATGGTTAATCGACTGCAAAAATTGTTTGATTGGACTATACATTTCGTGGATTCCACAGAATCATTATCAAGTAAATCAGAAGATATTTGGACTAGCCAAGTGGTAGGACCTGCGGTGAAGATAGTTAGATGTTTCCTTGGTAATAATGAGAGCTTGCCATGCACATCTGGGACATCAAATAGCAGTGGGATGAAAATACTTCAAAGGGACCTCTGGACTCAATACATATGCAAGGCCTGTGGAGATAGGGTGCTTAGAGGAGTACATGAGTGGGAACAACACAAACAGGGTCGTGGGCACCGGAAACGTATCTCTAGCCTCAAGAACAAATCACAAGGTCTCTGTTTGGTGCAACAATAG 1419 0.4362 MDDSEALGSSNPNDEAKAKKQKVVVIMGPTGSGKSRLAIDLASYFPVEAINADSMQVYRGLDVLTNKVPLFDQKGVPHHLLGTVSPNVEFTAKDFRDSVIPLINDISARNCLPVIVGGTNYFIQALVSPFLLDESVEDMDETCLDSPSDTTPLNKSFIPEKDSSNNDYDLLKDIDPVAANRMHPNNHRKISQYLSLYARTGVLPSKLFQGKAAEKWGQVGNSRYDCCFICVDASLPVLDRYVEQRVDCMMDAGLLNEVYDIYDPNADYSRGLRQAIGVREFEPLLKTHVIEEIYRRDNESTEDSRRGKGDKLSNDDLRELLKLSSDTKSISLMEEAIEKVKVNTRRLVRRQKRMVNRLQKLFDWTIHFVDSTESLSSKSEDIWTSQVVGPAVKIVRCFLGNNESLPCTSGTSNSSGMKILQRDLWTQYICKACGDRVLRGVHEWEQHKQGRGHRKRISSLKNKSQGLCLVQQ 472
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi01g0257 472 Gene3D - 20 423 IPR027417 -
Mibi01g0257 472 FunFam tRNA dimethylallyltransferase 423 466 - -
Mibi01g0257 472 Pfam IPP transferase 56 353 - -
Mibi01g0257 472 Gene3D Classic Zinc Finger 424 466 - -
Mibi01g0257 472 TIGRFAM miaA: tRNA dimethylallyltransferase 23 289 IPR018022 GO:0008033
Mibi01g0257 472 PANTHER TRNA DIMETHYLALLYLTRANSFERASE 20 398 IPR039657 -
Mibi01g0257 472 Hamap tRNA dimethylallyltransferase [miaA]. 23 376 IPR018022 GO:0008033
Mibi01g0257 472 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 20 259 IPR027417 -
Mibi01g0257 472 MobiDBLite consensus disorder prediction 1 20 - -
Mibi01g0257 472 Gene3D - 155 211 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi01g0257 Mibi-ChrMibi01 2512658 2515959 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi01g0257 26 462 C2H2 Transcription Factor Family AT2G27760 59.681 0.0 520