Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi01g0246 ATGGCGGACCCCACCATAACGGACCCTAACTCTCCGACCGAAACGCCGTCGAGCCCGGCGGCCAACGGCGGCGGCGCGCCGAATGTGCAGGCTGCCGTCGCCGGAGTTGAGCCAGCCGTAAACTCTGCCGCCGCCGCCGCCGGCGGCGGAGGAACGAACGAGGCTGAGGGTTCGGAAATGGCGGTGAAGAAACGAAGAGGGAGGCCTCGGAAGCACGGCGGCCTCTTCGAGATCTTATCATTCACTGGATCATACACCGCGGCTGCGCAGCGCAGAGGTGGCTTGTTCTGTGTTTCTCTGGCTAAAACTGATGGCAAGGTCTTTGGAGGTGGGTTAGAGGGCCCAATGATTGCTGCTGCACCTGTTCAACTAATAGTGGGCAGTTTCAAACCAAATATCAGTAAGGAGATTCATAGGAGACACTCAACCCCGTCCCTTGCTGTTCCCGACCTGTCCGGTCCCCCTGAACAGGATGAGCCTGTGCCGACAACTAATGGACGATCCGACGGCGTCAATCCCATAACAAGCAACGGAATAGCGGACAATGTGGTCCCTGCAACTCAGAATATGCCTCCTGCCTCTTCAAATGGTACTATCGTGAACTCCCAGCACATCGCTGGCCATGAAGAACCCACAGATATGGGGATCAAGAAGTGA 657 0.5738 MADPTITDPNSPTETPSSPAANGGGAPNVQAAVAGVEPAVNSAAAAAGGGGTNEAEGSEMAVKKRRGRPRKHGGLFEILSFTGSYTAAAQRRGGLFCVSLAKTDGKVFGGGLEGPMIAAAPVQLIVGSFKPNISKEIHRRHSTPSLAVPDLSGPPEQDEPVPTTNGRSDGVNPITSNGIADNVVPATQNMPPASSNGTIVNSQHIAGHEEPTDMGIKK 218
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi01g0246 218 MobiDBLite consensus disorder prediction 1 29 - -
Mibi01g0246 218 MobiDBLite consensus disorder prediction 1 24 - -
Mibi01g0246 218 Gene3D - 37 151 - -
Mibi01g0246 218 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 9 73 176 IPR039605 GO:0003680
Mibi01g0246 218 SUPERFAMILY AF0104/ALDC/Ptd012-like 69 139 - -
Mibi01g0246 218 MobiDBLite consensus disorder prediction 43 69 - -
Mibi01g0246 218 Pfam Plants and Prokaryotes Conserved (PCC) domain 46 130 IPR005175 -
Mibi01g0246 218 MobiDBLite consensus disorder prediction 137 218 - -
Mibi01g0246 218 MobiDBLite consensus disorder prediction 158 205 - -
Mibi01g0246 218 CDD DUF296 74 129 IPR005175 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi01g0246 Mibi-ChrMibi01 2390528 2392535 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi01g0246 72 129 AT-hook Motif Nuclear Localized (AHL) Family AT5G51590 54.839 2.88e-12 63.2